Detailed information NTG0168033

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: AL549_RS20205
• Genome accession: NZ_CP014049
• Coordinates: 2519568..2520575 (+)
• Length: 335 a.a.
• NCBI ID: WP_011079334.1
• Uniprot ID: -
• Organism: Vibrio vulnificus strain FDAARGOS_119
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 2514568..2525575

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AL549_RS20185 (AL549_18655)	metJ	2514674..2514991 (+)	318	WP_011079338.1	met regulon transcriptional regulator MetJ	-
AL549_RS20190 (AL549_18660)	-	2515078..2516355 (-)	1278	WP_011079337.1	malic enzyme-like NAD(P)-binding protein	-
AL549_RS20195 (AL549_18665)	rpmE	2516633..2516854 (-)	222	WP_011151292.1	50S ribosomal protein L31	-
AL549_RS20200 (AL549_18670)	priA	2517135..2519339 (+)	2205	WP_061058956.1	primosomal protein N'	-
AL549_RS20205 (AL549_18675)	cytR	2519568..2520575 (+)	1008	WP_011079334.1	DNA-binding transcriptional regulator CytR	Regulator
AL549_RS20210 (AL549_18680)	-	2520685..2521242 (+)	558	WP_011151294.1	SPOR domain-containing protein	-
AL549_RS20215 (AL549_18685)	hslV	2521393..2521947 (+)	555	WP_011079332.1	ATP-dependent protease subunit HslV	-
AL549_RS20220 (AL549_18690)	hslU	2521975..2523306 (+)	1332	WP_011079331.1	HslU--HslV peptidase ATPase subunit	-
AL549_RS20225 (AL549_18695)	-	2523472..2524389 (+)	918	WP_011079330.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
AL549_RS20230 (AL549_18700)	rraA	2524465..2524986 (+)	522	WP_011079329.1	ribonuclease E activity regulator RraA	-
AL549_RS20235 (AL549_18705)	zapB	2525208..2525450 (+)	243	WP_011079328.1	cell division protein ZapB	-

Sequence

Protein

• Length: 335 a.a.
• Molecular weight: 36842.38 Da
• Isoelectric Point: 6.4904

>NTDB_id=168033 AL549_RS20205 WP_011079334.1 2519568..2520575(+) (cytR) [Vibrio vulnificus strain FDAARGOS_119]
MATMKDVAQLAGVSTATVSRALMNPDKVSATTRKRVEDAVLEAGYSPNSLARNLRRNESRTIVAIVPDICDPYYTEIIRG
IEDAAIEQGYLVLLGDSGQQKRRESSLVNLVFTKQADGMLLLGTDLPFDVSKPEQKNLPPMVMACEFAPDLELPTVHIDN
LTSAFEAVNYLTQLGHKRIAQISGPKSAALCQFRQQGYQQALRRAGITMNPQYCVESEFSFEGGAKAIRHLLEMNDAPTA
VFCHCDTMAIGAIQEAKKLGFRVPQDLSIVGFDDIQFAQYCDPPLTTISQPRYEIGRQAMLMMLELLKGHDIHSGSRLLE
TKLVVRGSAAPPGLR

Nucleotide

• Length: 1008 bp

>NTDB_id=168033 AL549_RS20205 WP_011079334.1 2519568..2520575(+) (cytR) [Vibrio vulnificus strain FDAARGOS_119]
ATGGCGACAATGAAGGATGTTGCCCAGCTTGCAGGAGTTTCAACGGCAACGGTTTCGAGAGCGCTGATGAATCCAGACAA
AGTATCCGCCACAACGCGTAAGCGTGTGGAAGATGCAGTGTTGGAAGCTGGTTATTCCCCAAACTCGCTGGCACGCAATT
TACGCCGCAACGAGTCACGCACTATCGTCGCGATCGTTCCTGACATTTGTGATCCTTACTACACAGAGATCATTCGTGGC
ATTGAAGATGCCGCCATTGAACAGGGATATTTGGTTCTACTCGGTGACAGCGGCCAACAAAAGCGCCGTGAAAGCTCACT
CGTCAATCTCGTTTTTACCAAGCAAGCGGATGGTATGCTGTTGCTCGGTACCGACTTACCGTTTGATGTGAGCAAGCCAG
AACAGAAAAATCTTCCTCCGATGGTCATGGCTTGCGAGTTCGCCCCCGATCTCGAACTGCCGACGGTTCATATCGATAAC
TTGACCTCAGCATTTGAAGCGGTGAACTACCTGACCCAATTGGGCCACAAACGCATCGCCCAAATTTCAGGGCCAAAATC
CGCAGCACTTTGTCAGTTTAGACAACAAGGCTATCAACAAGCTTTGCGCCGTGCAGGCATCACAATGAACCCACAATACT
GTGTTGAGTCTGAGTTCTCTTTTGAAGGTGGGGCGAAAGCGATCCGTCATCTGCTAGAAATGAATGACGCGCCAACCGCC
GTTTTCTGCCATTGTGACACCATGGCTATCGGGGCGATTCAAGAAGCGAAAAAATTGGGCTTCCGAGTACCGCAAGATCT
GTCGATTGTCGGCTTCGATGACATTCAGTTTGCCCAATATTGCGATCCTCCACTAACCACCATCTCACAGCCACGCTATG
AGATTGGTCGTCAAGCGATGCTGATGATGTTAGAGCTGCTGAAAGGACATGACATTCACAGTGGCTCACGCTTACTTGAA
ACCAAATTGGTGGTTCGTGGTAGCGCAGCGCCTCCAGGCTTGCGCTAA

Domains

Predicted by InterproScan.

• Periplasmic binding protein-like domain (Peripla_BP_3) (168-328)

• Bacterial regulatory proteins, lacI family (LacI) (3-48)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	89.759	99.104	0.89
cytR	Vibrio cholerae C6706	88.253	99.104	0.875