Detailed information NTG0168013

Bioinformatically predicted

Overview

• Name: rexB
• Type: Machinery gene
• Locus tag: WH25_RS07940
• Genome accession: NZ_CP017295
• Coordinates: 1657100..1660381 (-)
• Length: 1093 a.a.
• NCBI ID: WP_046165373.1
• Uniprot ID: -
• Organism: Streptococcus gordonii strain IE35
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1652100..1665381

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
WH25_RS07930 (WH25_07930)	-	1653114..1653419 (-)	306	WP_046165375.1	DUF4298 domain-containing protein	-
WH25_RS07935 (WH25_07935)	rexA	1653453..1657103 (-)	3651	WP_046165374.1	helicase-exonuclease AddAB subunit AddA	Machinery gene
WH25_RS07940 (WH25_07940)	rexB	1657100..1660381 (-)	3282	WP_046165373.1	ATP-dependent nuclease subunit B	Machinery gene
WH25_RS07945 (WH25_07945)	-	1660776..1663949 (-)	3174	WP_046165372.1	CocE/NonD family hydrolase	-

Sequence

Protein

• Length: 1093 a.a.
• Molecular weight: 124270.20 Da
• Isoelectric Point: 5.0108

>NTDB_id=168013 WH25_RS07940 WP_046165373.1 1657100..1660381(-) (rexB) [Streptococcus gordonii strain IE35]
MKLLYTDIRHSLTKVLVAEAESLVATGKRVFYIAPNSLSFEKERAVLECLKNKASFAITVTRFAQMARYFVLNDVRKGQS
LDDIGLGMLIYRTLTELDDGELKVYGRIKKDPQFIQQLMDLYHELQTAQMSFADLEFLEEPEKREDLVKIFTAVTAALNK
GDFDSSSQIAAFAQHILAGDTDEELKNLALVIDGFTRFSAEEEYLVGLLHRKGVEIVIGTYASQKAYRAAFREGNLYQAS
VDFLRKLAEDYQVKPDYISHAEAEDAFGRISKVLESRYDFSEPAVEVSETDRSHLQIWATMNQKEELEYVAKSIRQRVHD
GARYKDIRLLLGDVEAYQLQLKTIFDQYQIPYYLGRSESMAQHPLVQFVESLERLKRYNFQLEDLLNLLKTGLYGDLTQE
ELDHFEQYLRFADIKGAGKLAKDFTANSQGKFDLDCLNHIRRRVMTPLQDFFKSRSQTASGLLAKFTEFVQAARLSDNLT
ALLQGESQQEQERHEEVWKAFSHVLEQFAQVFADSKVKLDDFLALILSGMLLSNYRTVPATVDVVKVQSYDLIEPLAAPY
VYAIGLTQERFPKIAQNKSLLSDEDRARLNDATDSQAELQIASSENLKKNRYTALSLINSATKELVLSAPALVNEVEDSM
STYLLELTAAPLSLPIIVKKPQASSDDIGSYRALLSQIIELYQEEIDREWTAEEQTFWAVAVRVLRKKLAAEGISIPQIS
KELKTESLQSETLQALYPKDQPLQLSASALNEYFKNQYGYFIKYILGLQEEWTIHPDARSHGNFLHRIFEKVLQGDTSRD
FDQRLEVAIDETMRETEFESLYNESSESLFTRQLLLDTAKSTGQVLAQSAGIETIGEETVFGNSKEPFLILEDGRAVSVR
GKVDRIDRLLADGSLGVVDYKSSETKFSYEKFFNGLNSQLPTYLAAIQELQGQQEGRDLFGAMYLQMTEPIVALKDTKKL
GDAVKEVAKTMQYKGLFLADKLASLGPVYEKSKVNSLSQEELAILLAYNEILYKKVAEGILAGHFEVNPYTENGRNIAPY
VDQFKAITGFEANRHLGQARQLNKLDLTKFEKRPVGEKLRQAWIEKMREELKK

Nucleotide

• Length: 3282 bp

>NTDB_id=168013 WH25_RS07940 WP_046165373.1 1657100..1660381(-) (rexB) [Streptococcus gordonii strain IE35]
ATGAAATTACTTTATACAGATATTCGCCATTCTTTGACCAAGGTTTTGGTGGCTGAGGCTGAGAGTTTGGTGGCGACTGG
TAAGCGAGTCTTTTATATTGCGCCAAATTCGCTTTCTTTTGAGAAGGAGCGGGCGGTTTTGGAATGTCTAAAAAACAAGG
CATCTTTTGCCATTACAGTGACGCGCTTTGCCCAGATGGCTCGGTATTTTGTCCTCAATGATGTCCGAAAAGGGCAGAGT
TTGGACGATATTGGTCTGGGGATGTTGATTTATCGGACCTTGACAGAGTTAGATGATGGAGAGCTTAAGGTCTATGGCAG
GATTAAGAAGGATCCCCAGTTTATCCAGCAGCTGATGGATCTTTACCATGAACTGCAGACCGCCCAGATGTCCTTTGCGG
ATTTGGAATTTCTTGAGGAGCCTGAGAAGCGGGAGGATCTGGTCAAGATTTTTACAGCGGTAACTGCTGCTCTGAATAAG
GGGGATTTTGATTCATCCTCTCAGATTGCTGCTTTTGCCCAGCATATTCTGGCTGGCGACACAGATGAGGAGTTGAAGAA
TTTGGCCCTTGTCATCGATGGATTTACTCGTTTTTCCGCCGAAGAGGAATACCTAGTCGGTCTCCTGCATCGGAAAGGTG
TGGAGATTGTTATAGGGACCTATGCCAGCCAAAAAGCCTATCGAGCAGCCTTTCGTGAGGGCAATCTCTATCAGGCTAGC
GTGGATTTTTTGAGAAAACTGGCCGAGGACTATCAGGTCAAGCCTGACTATATCTCTCATGCAGAAGCAGAAGATGCCTT
TGGACGGATTTCTAAGGTCTTGGAGAGTCGCTATGACTTTTCAGAACCAGCTGTTGAAGTTAGTGAGACAGACCGCTCGC
ATCTTCAGATTTGGGCTACTATGAACCAGAAAGAAGAGCTGGAGTATGTGGCTAAGTCCATCCGACAGCGGGTTCATGAT
GGGGCGCGTTATAAGGATATTCGCCTGCTTTTGGGAGATGTGGAAGCCTACCAGCTTCAGCTCAAGACTATTTTTGACCA
ATATCAGATTCCCTACTATCTGGGTCGGAGTGAGTCGATGGCGCAGCATCCGCTGGTCCAGTTTGTCGAATCTTTGGAGC
GGCTAAAACGCTATAATTTCCAACTGGAAGACCTGCTCAATCTCTTAAAGACGGGGCTCTATGGCGATTTGACTCAAGAA
GAGCTGGATCATTTTGAGCAATATCTGCGCTTTGCGGACATTAAGGGGGCAGGCAAGCTAGCCAAGGATTTCACGGCCAA
TAGCCAAGGGAAATTTGACCTAGACTGTCTCAATCATATTCGTCGCCGTGTCATGACTCCGCTGCAAGACTTTTTCAAAT
CCCGTAGTCAGACGGCGTCTGGTCTCTTAGCTAAGTTTACGGAGTTCGTCCAAGCAGCCCGTTTATCTGACAATTTGACG
GCTCTACTACAGGGAGAAAGTCAGCAGGAGCAGGAGCGCCATGAGGAAGTCTGGAAGGCTTTCAGTCATGTCTTAGAGCA
GTTTGCTCAAGTCTTTGCAGATAGCAAGGTCAAACTGGACGACTTTCTAGCCTTGATCCTCTCAGGCATGCTTTTGTCCA
ATTATCGGACGGTACCAGCGACGGTAGATGTGGTCAAGGTCCAGTCTTATGACCTGATAGAGCCTTTAGCAGCTCCTTAT
GTCTACGCAATTGGACTGACTCAAGAGCGTTTTCCGAAAATCGCGCAAAACAAGAGTTTGCTTAGTGATGAAGACCGGGC
TCGACTTAATGATGCGACGGATTCTCAAGCGGAACTGCAGATTGCTAGTTCTGAGAATCTCAAGAAGAATCGCTATACGG
CGCTGTCGCTGATAAATTCTGCTACCAAAGAGCTGGTCTTGTCTGCGCCGGCCTTGGTCAATGAAGTAGAGGACAGCATG
TCGACCTATCTGCTGGAATTGACTGCAGCTCCGCTTTCCTTGCCCATCATTGTCAAAAAGCCTCAGGCTTCCAGTGATGA
TATTGGCAGCTACCGAGCTCTCTTGTCTCAAATCATCGAGCTCTACCAAGAGGAGATTGACCGAGAGTGGACCGCAGAGG
AGCAGACTTTTTGGGCGGTGGCCGTGCGGGTTCTCCGCAAGAAATTGGCAGCAGAAGGCATCAGTATTCCACAAATTAGC
AAGGAATTGAAAACGGAGTCTCTGCAGTCGGAAACTCTGCAAGCCCTTTATCCAAAAGATCAGCCCCTCCAACTTTCAGC
CTCTGCTTTAAACGAATACTTCAAAAATCAATATGGCTATTTCATCAAATATATTCTAGGATTACAGGAAGAGTGGACCA
TCCATCCGGATGCTAGAAGCCACGGGAATTTTCTGCATCGAATTTTTGAGAAAGTACTTCAGGGGGATACTAGTCGAGAC
TTTGACCAGCGACTAGAAGTGGCAATAGACGAGACTATGCGGGAGACTGAATTTGAAAGTCTCTACAATGAATCTAGTGA
GAGTCTCTTTACTCGTCAATTGCTACTAGATACTGCTAAGTCAACTGGTCAAGTTCTGGCTCAGTCAGCTGGTATTGAAA
CGATTGGGGAAGAAACAGTCTTTGGGAACAGTAAAGAGCCTTTCCTTATCTTAGAAGATGGCAGAGCTGTTAGTGTTCGA
GGCAAGGTGGATAGAATTGACCGATTGCTAGCTGATGGGAGTCTGGGAGTCGTGGACTATAAGTCTAGCGAGACTAAGTT
TAGCTATGAAAAATTCTTTAATGGTCTGAATTCTCAGCTTCCGACTTATCTAGCGGCTATCCAGGAACTCCAAGGTCAGC
AGGAAGGTAGAGATCTTTTCGGTGCCATGTACTTGCAAATGACAGAGCCTATTGTTGCCCTTAAAGATACCAAAAAGCTA
GGAGATGCGGTCAAGGAAGTTGCGAAAACCATGCAGTACAAGGGACTCTTTTTAGCAGATAAGCTGGCCTCTTTGGGTCC
TGTTTATGAAAAGAGCAAGGTTAATAGTCTCAGTCAAGAAGAACTGGCTATTTTACTAGCTTATAATGAAATTCTCTATA
AAAAAGTAGCTGAAGGCATTCTAGCTGGTCACTTTGAGGTTAATCCCTATACAGAAAATGGCCGGAATATAGCACCTTAT
GTCGATCAGTTTAAGGCTATTACAGGCTTTGAAGCCAATCGCCACCTAGGCCAAGCCAGACAGTTAAATAAATTAGATTT
GACTAAATTTGAAAAACGTCCAGTTGGTGAGAAACTGCGCCAAGCATGGATAGAAAAGATGAGGGAGGAGTTGAAAAAAT
GA

Domains

Predicted by InterProScan.

• PD-(D/E)XK nuclease superfamily (PDDEXK_1) (744-1031)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rexB	Streptococcus pneumoniae R6	57.612	100	0.578