Detailed information NTG0167996

Bioinformatically predicted

Overview

• Name: cqsS
• Type: Regulator
• Locus tag: AL464_RS20110
• Genome accession: NZ_CP014047
• Coordinates: 715005..717053 (-)
• Length: 682 a.a.
• NCBI ID: WP_029805153.1
• Uniprot ID: -
• Organism: Vibrio parahaemolyticus strain ATCC 17802
• Function: autoinducer sensor (predicted from homology) Competence regulation

Genomic Context

Location: 710005..722053

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AL464_RS20095 (AL464_18275)	-	711420..712157 (+)	738	WP_021821556.1	EAL domain-containing protein	-
AL464_RS20100 (AL464_18280)	ylqF	712447..713391 (+)	945	WP_005454328.1	ribosome biogenesis GTPase YlqF	-
AL464_RS20105 (AL464_18285)	cqsA	713746..714927 (+)	1182	WP_021450908.1	alpha-hydroxyketone-type quorum-sensing autoinducer synthase	Regulator
AL464_RS20110 (AL464_18290)	cqsS	715005..717053 (-)	2049	WP_029805153.1	response regulator	Regulator
AL464_RS20115 (AL464_18295)	-	717373..717990 (+)	618	WP_029805156.1	HAD family hydrolase	-
AL464_RS20120 (AL464_18300)	-	718077..718625 (-)	549	WP_005481267.1	GNAT family N-acetyltransferase	-
AL464_RS20125 (AL464_18305)	-	718897..720021 (+)	1125	WP_029805158.1	acyl-CoA desaturase	-
AL464_RS20130 (AL464_18310)	dcuC	720375..721742 (+)	1368	WP_005454288.1	anaerobic C4-dicarboxylate transporter DcuC	-

Sequence

Protein

• Length: 682 a.a.
• Molecular weight: 78290.15 Da
• Isoelectric Point: 6.1037

>NTDB_id=167996 AL464_RS20110 WP_029805153.1 715005..717053(-) (cqsS) [Vibrio parahaemolyticus strain ATCC 17802]
MDSIRKVYEYAEPNLTLVGWMGFIGFPLYYFVWDFMFPQSYENLPLRLFCSALFFGIIFRNRLSSSWRKYVHVYYQITIT
TCLPFFFFYMLLMNDWSNVWVMSFMSAIFLHILLVHVTRVMFAQTFAGIGLATFFAWIAKGFHLDITMDWTHVPIFLFIY
VFGNMFYFRNQVEHEAKVSLAKSFGAGIAHEMRNPLSGLCTSIDVIQSVLPNKKAMGKKDQYVMSGEDVTLLREVSEDAM
NIIHSGNETIDLLLTSIDENRVSRSSFKRYSAQSVVEKAIESFSYKRSTDRFAISFDARSEFDFLGSDTLLKYVMYNLFK
NAFHHRSSDEFHIHVSMQSNDTVNQIVVTDNGSGIAPDVIRHIFQDFYTTGKSGSYGLGLPFCKKVMRSFGGNIKCISQP
GEWSQFTLTFPPITSDTVTEIKDELTKMKSILLVSNQDIIVQKMADISRFMGFDVTVLDVKSVFKKKEYEFEFDLIFVDV
ESLDVLENQLDRIESLLSFTEARVVYLFEHKPAQRAKKVGHDPIWVETQAWLLNTKATIERLLYDSTYISSTLPSAPLDK
SIKRTIMVVDDNESLRKFTAMLLEKQGFEVVQKEDGQQALDTLEKENIDLILMDIEMPIMDGVEASRRIRNSEKSYASVP
IIAHTGDSSPVTLDKIGSSGMSDFIVKPADKNRLFDKIANWI

Nucleotide

• Length: 2049 bp

>NTDB_id=167996 AL464_RS20110 WP_029805153.1 715005..717053(-) (cqsS) [Vibrio parahaemolyticus strain ATCC 17802]
ATGGATTCGATACGTAAGGTATATGAGTACGCAGAGCCCAATTTAACATTAGTTGGTTGGATGGGATTTATTGGCTTCCC
GCTCTACTACTTCGTTTGGGACTTCATGTTCCCGCAATCCTATGAAAACTTGCCGCTACGTTTGTTCTGTTCCGCACTGT
TTTTTGGCATCATTTTTCGTAACCGTTTGTCGTCATCATGGCGAAAGTACGTGCATGTCTATTATCAAATAACGATTACG
ACCTGTTTACCTTTCTTCTTTTTTTATATGTTGCTCATGAATGATTGGTCCAATGTTTGGGTGATGTCATTCATGTCGGC
GATTTTCCTGCATATTTTGTTGGTTCATGTCACAAGGGTCATGTTTGCTCAGACGTTCGCTGGTATTGGTCTAGCGACGT
TTTTTGCGTGGATCGCGAAAGGCTTTCATCTCGATATCACAATGGATTGGACGCATGTGCCGATATTTTTGTTTATTTAT
GTGTTTGGCAACATGTTCTATTTCCGAAATCAGGTCGAGCATGAAGCAAAAGTATCGCTCGCGAAGTCGTTTGGCGCTGG
TATTGCTCATGAAATGCGTAATCCACTCAGTGGCTTATGTACGTCGATAGATGTTATTCAGTCTGTCTTGCCTAACAAAA
AGGCGATGGGCAAAAAAGATCAGTATGTCATGAGTGGTGAAGACGTGACCTTGCTCCGTGAAGTGAGCGAAGATGCGATG
AACATTATTCATTCAGGCAACGAGACAATCGATTTATTGCTCACATCGATTGATGAAAATCGCGTATCTCGCTCTTCCTT
CAAAAGATATTCTGCTCAATCGGTGGTTGAAAAAGCCATTGAGAGTTTCAGTTATAAACGTTCGACAGACAGGTTCGCGA
TTTCATTCGATGCAAGAAGTGAGTTTGACTTTTTGGGTAGCGATACATTGTTAAAGTACGTCATGTATAACTTGTTTAAG
AACGCATTTCATCATCGCAGTTCAGACGAGTTTCATATTCATGTGAGTATGCAGAGTAATGACACGGTCAACCAAATTGT
AGTGACGGACAACGGATCAGGTATTGCGCCAGATGTGATTCGACATATCTTTCAGGACTTCTATACCACAGGTAAATCGG
GCAGTTATGGCCTTGGACTACCGTTTTGTAAGAAAGTCATGCGTTCGTTTGGCGGTAATATTAAGTGCATTTCCCAGCCG
GGAGAGTGGTCACAGTTTACGTTGACTTTTCCGCCTATCACATCAGATACGGTAACGGAAATTAAAGATGAGCTGACCAA
AATGAAATCAATTTTATTGGTCAGTAATCAAGACATTATCGTGCAAAAAATGGCAGATATTAGTCGCTTCATGGGATTTG
ATGTCACCGTTTTAGATGTAAAAAGCGTCTTTAAAAAGAAAGAATACGAGTTTGAATTTGACCTGATATTCGTCGATGTG
GAAAGCCTTGATGTTTTAGAAAACCAATTAGACAGAATCGAATCGTTACTTTCATTTACTGAAGCGCGTGTGGTGTATCT
TTTTGAGCACAAACCTGCGCAACGAGCTAAAAAAGTTGGCCATGATCCGATTTGGGTAGAGACTCAGGCGTGGCTGCTAA
ACACCAAAGCTACGATTGAACGTTTGCTTTATGATTCCACTTATATCTCTTCAACGTTGCCATCTGCGCCTTTAGATAAA
TCCATCAAACGAACCATCATGGTTGTGGATGATAACGAGTCTCTGCGTAAGTTTACGGCGATGTTGCTAGAGAAGCAGGG
ATTTGAAGTGGTACAAAAGGAAGATGGTCAGCAAGCATTGGACACTCTTGAAAAAGAAAATATCGATCTGATTTTGATGG
ATATTGAGATGCCAATCATGGATGGAGTAGAAGCGTCGCGACGTATCCGTAACTCAGAAAAGTCGTATGCATCGGTGCCG
ATTATTGCGCATACGGGAGACAGTTCTCCTGTAACGCTAGATAAAATAGGCTCATCCGGCATGTCCGACTTTATCGTTAA
ACCCGCTGATAAGAATCGCCTTTTCGATAAAATTGCTAACTGGATTTAA

Domains

Predicted by InterproScan.

• Response regulator receiver domain (Response_reg) (566-678)

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (309-412)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cqsS	Vibrio cholerae strain A1552	48.834	100	0.491