Detailed information    

insolico Bioinformatically predicted

Overview

Name   luxO   Type   Regulator
Locus tag   AL541_RS10655 Genome accession   NZ_CP014040
Coordinates   2119404..2120810 (-) Length   468 a.a.
NCBI ID   WP_005380768.1    Uniprot ID   A0AAW9BFV3
Organism   Vibrio alginolyticus strain FDAARGOS_110     
Function   promote HapR production (predicted from homology)   
Competence regulation

Genomic Context

Location: 2114404..2125810
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AL541_RS10620 (AL541_18990) moaE 2114910..2115365 (-) 456 WP_017821374.1 molybdopterin synthase catalytic subunit MoaE -
  AL541_RS10625 (AL541_18995) moaD 2115367..2115624 (-) 258 WP_042523112.1 molybdopterin synthase sulfur carrier subunit -
  AL541_RS10630 (AL541_19000) moaC 2115621..2116100 (-) 480 WP_005380779.1 cyclic pyranopterin monophosphate synthase MoaC -
  AL541_RS10635 (AL541_19005) moaB 2116127..2116639 (-) 513 WP_005388935.1 molybdenum cofactor biosynthesis protein B -
  AL541_RS10640 (AL541_19010) moaA 2116741..2117730 (-) 990 WP_005380776.1 GTP 3',8-cyclase MoaA -
  AL541_RS10645 (AL541_19015) - 2118029..2118925 (+) 897 WP_017821373.1 YvcK family protein -
  AL541_RS10650 (AL541_19020) luxU 2119063..2119407 (-) 345 WP_005380770.1 quorum-sensing phosphorelay protein LuxU -
  AL541_RS10655 (AL541_19025) luxO 2119404..2120810 (-) 1407 WP_005380768.1 quorum-sensing sigma-54 dependent transcriptional regulator LuxO Regulator
  AL541_RS10660 (AL541_19030) uvrB 2121102..2123132 (-) 2031 WP_017636056.1 excinuclease ABC subunit UvrB -

Sequence

Protein


Download         Length: 468 a.a.        Molecular weight: 52094.70 Da        Isoelectric Point: 6.2547

>NTDB_id=167825 AL541_RS10655 WP_005380768.1 2119404..2120810(-) (luxO) [Vibrio alginolyticus strain FDAARGOS_110]
MQQKPEGPKSRYLLMVEDTASVAALYRSYLTPLGIDINIVGTGRDAIESLNHRIPDLILLDLRLPDMTGMDVLHAVKKSH
PDVPIIFMTAHGSIDTAVEAMRHGSQDFLIKPCEADRLRVTVNNAIRKATKLKNEADNPGNQSYQGFIGSSQTMQQVYRT
IDSAASSKASIFITGESGTGKEVCAEAIHAASKRGDKPFIAINCAAIPKDLIESELFGHVKGAFTGAANDRQGAAELADG
GTLFLDELCEMDLDLQTKLLRFIQTGTFQKVGSSKMKSVDVRFVCATNRDPWKEVQEGRFREDLYYRLYVIPLHLPPLRE
RGEDVIEIAYSLLGYMSHEEGKSFIRFAPDVIERFNSYEWPGNVRQLQNVLRNIVVLNNGKEITLDMLPPPLNQPLDRPS
SVAKLIEPKAMTASEIMPLWMTEKMAIEQAIEACDGNIPRAAGYLDVSPSTIYRKLQAWNGKEERQKV

Nucleotide


Download         Length: 1407 bp        

>NTDB_id=167825 AL541_RS10655 WP_005380768.1 2119404..2120810(-) (luxO) [Vibrio alginolyticus strain FDAARGOS_110]
ATGCAACAAAAACCCGAAGGCCCAAAGTCTCGTTACCTTTTAATGGTCGAGGACACCGCATCTGTTGCGGCTCTGTACCG
CTCATACCTGACACCGCTTGGCATAGATATCAATATTGTCGGCACAGGTAGGGATGCCATTGAGAGCCTAAATCATCGAA
TTCCAGATCTTATTTTACTCGATCTCCGTCTGCCAGATATGACGGGGATGGACGTTTTACATGCCGTTAAAAAGAGTCAT
CCCGACGTACCTATAATTTTTATGACCGCTCACGGTTCTATCGATACCGCTGTCGAGGCCATGCGTCATGGCTCACAAGA
CTTTCTAATTAAACCGTGTGAAGCAGACCGTTTACGTGTCACGGTTAACAATGCCATTCGTAAAGCGACCAAGCTAAAAA
ATGAAGCCGATAATCCAGGCAATCAGAGCTATCAGGGGTTTATCGGCAGTAGCCAAACCATGCAGCAGGTTTACCGTACG
ATAGATTCAGCGGCGAGCAGTAAAGCGAGTATTTTTATCACAGGTGAAAGTGGTACTGGTAAAGAGGTATGTGCCGAGGC
TATTCACGCAGCAAGTAAACGTGGTGACAAACCTTTTATTGCAATTAACTGTGCTGCAATTCCAAAAGATTTGATTGAGA
GTGAACTGTTTGGTCACGTAAAAGGGGCCTTTACTGGCGCTGCGAATGATCGTCAAGGGGCAGCTGAGTTAGCGGATGGC
GGCACACTTTTTCTAGATGAGCTTTGTGAGATGGACTTGGATTTACAAACCAAGTTGCTACGATTTATTCAAACGGGCAC
ATTCCAAAAAGTGGGTTCCTCAAAAATGAAGAGCGTGGATGTGCGCTTTGTTTGTGCCACTAACCGTGATCCCTGGAAAG
AGGTACAAGAAGGTCGATTCCGTGAAGATTTGTACTATCGTTTGTATGTCATTCCTTTGCATTTACCGCCTTTACGCGAA
CGAGGCGAAGATGTTATTGAAATTGCATACTCACTGCTAGGTTACATGTCACACGAAGAAGGAAAAAGCTTCATACGTTT
TGCGCCTGATGTCATCGAGCGATTCAACAGCTATGAGTGGCCGGGTAACGTTCGTCAGTTACAAAACGTGCTACGCAATA
TCGTTGTTCTAAACAACGGTAAAGAGATTACGTTGGACATGTTACCGCCACCGTTGAATCAACCGCTTGACCGTCCGTCG
TCTGTGGCTAAATTAATTGAGCCGAAAGCGATGACCGCATCTGAGATTATGCCATTATGGATGACGGAAAAAATGGCAAT
CGAGCAAGCGATTGAAGCATGTGATGGCAATATTCCTCGAGCGGCGGGATACCTTGATGTCAGTCCGTCGACGATTTACC
GTAAGTTACAGGCATGGAACGGCAAGGAAGAGCGGCAAAAAGTATGA

Domains

Predicted by InterproScan.

Sigma-54 interaction domain (Sigma54_activat)

(148-313)

Response regulator receiver domain (Response_reg)

(14-122)

Bacterial regulatory protein, Fis family (HTH_8)

(419-459)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  luxO Vibrio cholerae strain A1552

86.414

95.94

0.829

Multiple sequence alignment