Detailed information    

insolico Bioinformatically predicted

Overview

Name   luxP   Type   Regulator
Locus tag   AL537_RS19235 Genome accession   NZ_CP014037
Coordinates   535176..536273 (+) Length   365 a.a.
NCBI ID   WP_074190484.1    Uniprot ID   A0AAE4S4N7
Organism   Vibrio diabolicus strain FDAARGOS_105     
Function   autoinducer sensor (predicted from homology)   
Competence regulation

Genomic Context

Location: 530176..541273
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AL537_RS19205 (AL537_19200) - 531505..532842 (-) 1338 WP_104972359.1 MATE family efflux transporter -
  AL537_RS19210 (AL537_19205) - 532964..533278 (-) 315 WP_005373603.1 DUF496 family protein -
  AL537_RS19215 (AL537_19210) - 533519..533722 (+) 204 WP_031780656.1 hypothetical protein -
  AL537_RS19220 (AL537_19215) - 533888..534538 (+) 651 WP_104972360.1 YceH family protein -
  AL537_RS19225 (AL537_19220) - 534535..534855 (+) 321 WP_012842363.1 GIY-YIG nuclease family protein -
  AL537_RS19235 (AL537_19230) luxP 535176..536273 (+) 1098 WP_074190484.1 autoinducer 2-binding periplasmic protein LuxP Regulator
  AL537_RS19240 (AL537_19235) luxQ 536273..538849 (+) 2577 WP_005397731.1 quorum-sensing autoinducer 2 sensor kinase/phosphatase LuxQ -
  AL537_RS19245 (AL537_19240) - 539151..539606 (+) 456 WP_005397727.1 MarR family transcriptional regulator -
  AL537_RS19250 (AL537_19245) - 539642..540700 (+) 1059 WP_104972361.1 HlyD family secretion protein -

Sequence

Protein


Download         Length: 365 a.a.        Molecular weight: 41584.91 Da        Isoelectric Point: 4.9790

>NTDB_id=167761 AL537_RS19235 WP_074190484.1 535176..536273(+) (luxP) [Vibrio diabolicus strain FDAARGOS_105]
MKKALVFSLMSMATVAPIAQATQVLNGYWAYQEFLDQFPEQKQLTNALADAVRETPVPVERDKKRPLKISVVYPGQQISD
YWIRNIDAFEQRLDKLDIDYQLNQVFTRPNADIKQQSLSLMEALKSNSDYLIFTLDTTRHRKFVEHVLDSKKTKLILQNI
TTPVRDWEDHQPFLYVGFDHAEGSRELAVEFGKRFPKQSHYSVLYFSEGYISDIRGNTFINQVNRDNNFELQSAYYTKAT
KQSGYEAAKASLEKYPDVDFIYACSTDVALGAVDALKELGRDDVMINGWGGGSAELEALSKGELDVTVMRMNDDTGIAMA
EAIKWDLEGKPVPTVYSGDFEVVTKSDSPERIEALRKRAFRYSDN

Nucleotide


Download         Length: 1098 bp        

>NTDB_id=167761 AL537_RS19235 WP_074190484.1 535176..536273(+) (luxP) [Vibrio diabolicus strain FDAARGOS_105]
ATGAAAAAAGCGTTAGTATTCTCCCTGATGTCAATGGCCACTGTCGCGCCGATAGCGCAAGCCACTCAAGTCCTCAATGG
GTATTGGGCATATCAAGAATTTTTAGACCAGTTTCCAGAACAGAAGCAGTTAACGAATGCGTTGGCTGACGCCGTGCGAG
AGACTCCTGTTCCGGTTGAAAGAGACAAAAAACGTCCGTTAAAAATTTCTGTGGTTTATCCAGGCCAACAGATTTCGGAT
TATTGGATTCGAAATATAGACGCATTTGAACAGCGTTTAGATAAACTCGATATCGACTATCAACTTAATCAAGTATTTAC
CCGTCCCAACGCAGATATTAAGCAACAAAGTTTGTCTTTAATGGAAGCGCTGAAGAGCAACTCCGATTATCTGATTTTCA
CTCTCGATACCACTAGGCATCGTAAGTTTGTTGAACACGTCTTAGACTCAAAGAAAACCAAGTTGATCTTACAAAATATC
ACTACACCGGTAAGAGATTGGGAGGATCACCAACCGTTCCTTTATGTTGGTTTTGATCATGCTGAAGGCAGCCGTGAGCT
TGCCGTGGAGTTTGGTAAGCGTTTTCCAAAACAGAGCCATTATAGTGTGCTCTACTTTTCAGAAGGATATATCAGCGATA
TCAGAGGTAATACCTTTATCAATCAAGTCAACCGTGATAACAACTTTGAACTACAATCTGCTTACTATACCAAAGCGACA
AAGCAGTCTGGGTATGAAGCAGCAAAAGCGAGTTTGGAAAAATACCCTGACGTCGATTTTATTTATGCGTGTTCTACAGA
TGTTGCGCTAGGTGCTGTTGATGCGCTGAAAGAGTTAGGGCGTGATGATGTCATGATCAACGGCTGGGGTGGCGGCTCTG
CAGAATTAGAAGCGCTTTCGAAAGGGGAGTTAGACGTTACTGTTATGCGTATGAACGATGATACTGGCATTGCAATGGCA
GAAGCGATTAAGTGGGATCTTGAAGGGAAACCCGTTCCAACCGTTTATTCTGGTGATTTTGAAGTCGTCACGAAATCTGA
TTCTCCAGAAAGAATTGAAGCATTAAGAAAACGCGCATTTAGATACTCAGACAATTGA

Domains

Predicted by InterproScan.

Periplasmic binding protein domain (Peripla_BP_4)

(69-324)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  luxP Vibrio cholerae strain A1552

64.286

99.726

0.641

Multiple sequence alignment