Detailed information NTG0167746

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: AL537_RS05905
• Genome accession: NZ_CP014036
• Coordinates: 1191994..1193001 (-)
• Length: 335 a.a.
• NCBI ID: WP_005379543.1
• Uniprot ID: -
• Organism: Vibrio diabolicus strain FDAARGOS_105
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 1186994..1198001

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AL537_RS05880 (AL537_05880)	rraA	1187224..1187730 (-)	507	WP_005397954.1	ribonuclease E activity regulator RraA	-
AL537_RS05885 (AL537_05885)	-	1187807..1188724 (-)	918	WP_047009017.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
AL537_RS26315	-	1188935..1189069 (+)	135	WP_268845393.1	hypothetical protein	-
AL537_RS05890 (AL537_05890)	hslU	1189199..1190530 (-)	1332	WP_006742475.1	HslU--HslV peptidase ATPase subunit	-
AL537_RS05895 (AL537_05895)	hslV	1190554..1191105 (-)	552	WP_005383176.1	ATP-dependent protease subunit HslV	-
AL537_RS05900 (AL537_05900)	ftsN	1191221..1191769 (-)	549	WP_104971206.1	cell division protein FtsN	-
AL537_RS05905 (AL537_05905)	cytR	1191994..1193001 (-)	1008	WP_005379543.1	DNA-binding transcriptional regulator CytR	Regulator
AL537_RS05910 (AL537_05910)	priA	1193326..1195527 (-)	2202	WP_074191982.1	primosomal protein N'	-
AL537_RS05920 (AL537_05920)	rpmE	1195823..1196044 (+)	222	WP_005379546.1	50S ribosomal protein L31	-
AL537_RS05925 (AL537_05925)	rpsJ	1196500..1196811 (+)	312	WP_004410492.1	30S ribosomal protein S10	-
AL537_RS05930 (AL537_05930)	rplC	1196826..1197455 (+)	630	WP_005379555.1	50S ribosomal protein L3	-

Sequence

Protein

• Length: 335 a.a.
• Molecular weight: 36892.42 Da
• Isoelectric Point: 6.2447

>NTDB_id=167746 AL537_RS05905 WP_005379543.1 1191994..1193001(-) (cytR) [Vibrio diabolicus strain FDAARGOS_105]
MATMKDVAQLAGVSTATVSRALMNPEKVSSSTRKRVEDAVLEAGYSPNSLARNLRRNESKTIVTIVPDICDPYFSEIIRG
IEDAAMEHGYLVLLGDSGQQKKRESSFVNLVFTKQADGMLLLGTDLPFDVSKPEQKNLPPMVMACEFAPELELPTVHIDN
LTSAFEAVNYLTQLGHKRIAQISGPDTAILCQFRQQGYQQALRRAGINKDPQYSVITEFSFDGGAKAVRKLLELPEPPTA
IFCHCDTMAIGAIQEAKKLGLRVPQDLSVVGFDDINFAQYCDPPLTTISQPRYEIGRQAMLMMLEMLKGHDVHSGSRLLE
TNLVIRGSAAPPQRP

Nucleotide

• Length: 1008 bp

>NTDB_id=167746 AL537_RS05905 WP_005379543.1 1191994..1193001(-) (cytR) [Vibrio diabolicus strain FDAARGOS_105]
ATGGCGACAATGAAGGATGTTGCCCAGCTTGCGGGAGTGTCTACGGCTACGGTATCTCGAGCATTAATGAACCCAGAGAA
GGTCTCTTCTTCAACGAGAAAAAGAGTAGAAGATGCCGTACTTGAAGCGGGTTATTCTCCAAACTCATTAGCGCGTAACT
TACGTAGAAACGAATCAAAAACCATTGTCACTATCGTTCCCGACATCTGTGATCCTTATTTTTCTGAAATTATTCGCGGC
ATTGAAGATGCTGCCATGGAACATGGCTATCTAGTCCTGCTGGGCGATAGCGGACAACAGAAGAAACGCGAAAGTTCTTT
CGTTAACCTCGTATTTACTAAGCAGGCGGATGGAATGCTACTGCTTGGCACAGATCTACCGTTCGATGTCAGTAAGCCAG
AACAAAAGAACTTACCTCCGATGGTGATGGCGTGTGAATTTGCGCCAGAGTTAGAACTTCCAACAGTACATATTGATAAC
CTGACCTCAGCATTTGAAGCGGTGAATTACCTAACCCAACTAGGTCATAAACGCATCGCGCAAATCTCGGGGCCAGATAC
GGCAATATTGTGTCAGTTCCGCCAGCAAGGTTATCAACAAGCCTTGCGCCGTGCCGGCATCAATAAAGATCCACAATATA
GTGTCATTACTGAGTTCTCTTTTGATGGCGGAGCAAAAGCCGTTCGTAAACTGCTCGAATTGCCTGAGCCACCAACGGCT
ATTTTCTGTCACTGTGACACAATGGCCATCGGCGCAATTCAAGAAGCGAAAAAGCTTGGCTTACGAGTACCGCAAGATCT
CTCTGTTGTAGGCTTTGATGACATTAACTTCGCTCAGTACTGCGATCCACCGTTGACCACTATCTCTCAGCCTCGCTATG
AGATTGGTCGACAAGCGATGCTAATGATGCTTGAGATGTTAAAAGGACACGACGTGCATTCAGGCTCGCGCCTACTTGAA
ACTAACCTCGTCATTCGCGGAAGTGCAGCGCCACCACAGCGCCCTTAA

Domains

Predicted by InterproScan.

• Bacterial regulatory proteins, lacI family (LacI) (3-48)

• Periplasmic binding protein-like domain (Peripla_BP_3) (168-328)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	98.204	99.701	0.979
cytR	Vibrio cholerae C6706	89.521	99.701	0.893