Detailed information NTG0167711

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: AL536_RS44570
• Genome accession: NZ_CP014035
• Coordinates: 3005395..3006402 (+)
• Length: 335 a.a.
• NCBI ID: WP_020429332.1
• Uniprot ID: A0AAX2LJL2
• Organism: Vibrio fluvialis strain ATCC 33809
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 3000395..3011402

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AL536_RS44550 (AL536_21580)	metJ	3000542..3000859 (+)	318	WP_020329393.1	met regulon transcriptional regulator MetJ	-
AL536_RS44555 (AL536_21585)	-	3000936..3002213 (-)	1278	WP_061057142.1	malic enzyme-like NAD(P)-binding protein	-
AL536_RS44560 (AL536_21590)	rpmE	3002425..3002643 (-)	219	WP_020329395.1	50S ribosomal protein L31	-
AL536_RS44565 (AL536_21595)	priA	3002889..3005090 (+)	2202	WP_061057143.1	primosomal protein N'	-
AL536_RS44570 (AL536_21600)	cytR	3005395..3006402 (+)	1008	WP_020429332.1	DNA-binding transcriptional regulator CytR	Regulator
AL536_RS44575 (AL536_21605)	ftsN	3006532..3007089 (+)	558	WP_024373673.1	cell division protein FtsN	-
AL536_RS44580 (AL536_21610)	hslV	3007225..3007779 (+)	555	WP_020329399.1	ATP-dependent protease subunit HslV	-
AL536_RS44585 (AL536_21615)	hslU	3007821..3009152 (+)	1332	WP_020329400.1	HslU--HslV peptidase ATPase subunit	-
AL536_RS44590 (AL536_21620)	-	3009241..3010158 (+)	918	WP_020329401.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
AL536_RS44595 (AL536_21625)	rraA	3010234..3010761 (+)	528	WP_020329402.1	ribonuclease E activity regulator RraA	-

Sequence

Protein

• Length: 335 a.a.
• Molecular weight: 36914.45 Da
• Isoelectric Point: 6.3516

>NTDB_id=167711 AL536_RS44570 WP_020429332.1 3005395..3006402(+) (cytR) [Vibrio fluvialis strain ATCC 33809]
MATMKDVAQLAGVSTATVSRALMNPEKVSASTRKRVEEAVLEAGYSPNSLARNLRRNESKTIVAIVPDICDPYYTEIIRG
IEDAAMEHGYLVLLGDSGQQKKRESSFVNLVFTKQADGMLLLGTDLPFDVSKPEQKNLPPMVMACEFAPELELPTVHIDN
LTSAFEAVNYLTQMGHKRVAQIAGPEAAVLCQFRQQGYQQALRRAGITRNPTYSMSGDFTFESGAKAVRQLLALPEPPTA
IFCHNDTMAIGAIQEAKRLGLRVPQDLSVVGFDDIQFAQYCDPPLTTISQPRYEIGRQAMLMMLELLRGHDVRAGSRLLE
TQLVVRESAAPPRSM

Nucleotide

• Length: 1008 bp

>NTDB_id=167711 AL536_RS44570 WP_020429332.1 3005395..3006402(+) (cytR) [Vibrio fluvialis strain ATCC 33809]
ATGGCGACAATGAAGGATGTTGCCCAGCTTGCAGGCGTTTCGACGGCGACGGTCTCGCGCGCTCTGATGAATCCCGAAAA
AGTTTCAGCCTCAACCCGTAAGCGGGTCGAGGAGGCAGTTTTAGAAGCTGGCTATTCACCGAATTCTTTGGCCCGAAATC
TGCGCCGCAATGAGTCAAAAACCATTGTCGCGATAGTGCCGGATATCTGTGACCCTTATTACACAGAGATCATTCGTGGT
ATCGAAGATGCTGCAATGGAACACGGTTATCTGGTGCTGCTGGGCGACAGCGGACAGCAGAAAAAACGTGAAAGCTCATT
TGTGAACCTGGTGTTTACCAAACAAGCGGACGGCATGTTACTGCTGGGGACTGACTTGCCGTTTGATGTGAGCAAACCCG
AGCAGAAAAACCTGCCACCGATGGTGATGGCGTGTGAGTTTGCGCCGGAGCTTGAGCTACCTACGGTACACATTGATAAC
CTGACATCGGCGTTTGAAGCCGTGAACTATCTGACTCAGATGGGGCACAAACGTGTGGCACAAATCGCCGGACCGGAAGC
CGCGGTGCTGTGTCAGTTTCGTCAGCAAGGTTATCAGCAGGCGCTGCGTCGTGCGGGTATCACTCGCAATCCGACCTACA
GTATGAGTGGTGACTTTACTTTTGAGTCCGGAGCCAAAGCGGTGCGTCAATTATTGGCCCTGCCTGAGCCACCAACGGCT
ATCTTCTGTCACAACGATACCATGGCGATTGGCGCGATTCAGGAAGCGAAACGTCTGGGACTGCGCGTACCGCAAGATCT
CTCTGTGGTGGGCTTTGATGACATTCAATTCGCCCAGTACTGCGATCCACCGCTGACGACCATCTCTCAGCCTCGCTACG
AGATTGGCCGTCAGGCGATGCTGATGATGCTGGAATTGCTGCGTGGTCATGACGTGCGTGCCGGCTCACGTTTGCTGGAA
ACTCAGCTGGTGGTGCGTGAGAGCGCAGCGCCGCCTCGTTCGATGTAA

Domains

Predicted by InterproScan.

• Bacterial regulatory proteins, lacI family (LacI) (3-48)

• Periplasmic binding protein-like domain (Peripla_BP_3) (168-328)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio cholerae C6706	94.277	99.104	0.934
cytR	Vibrio parahaemolyticus RIMD 2210633	90.691	99.403	0.901