Detailed information NTG0167682

Bioinformatically predicted

Overview

• Name: chiS
• Type: Regulator
• Locus tag: AL536_RS31160
• Genome accession: NZ_CP014035
• Coordinates: 164810..168199 (-)
• Length: 1129 a.a.
• NCBI ID: WP_061056162.1
• Uniprot ID: A0AAX2LNE0
• Organism: Vibrio fluvialis strain ATCC 33809
• Function: chitin sensor (predicted from homology) Competence regulation

Genomic Context

Location: 159810..173199

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AL536_RS31145 (AL536_08365)	-	160272..161297 (-)	1026	WP_061056160.1	ABC transporter permease	-
AL536_RS31150 (AL536_08370)	-	161300..162286 (-)	987	WP_020332023.1	ABC transporter permease	-
AL536_RS31155 (AL536_08375)	-	162452..164122 (-)	1671	WP_061056161.1	ABC transporter substrate-binding protein	-
AL536_RS31160 (AL536_08380)	chiS	164810..168199 (-)	3390	WP_061056162.1	response regulator	Regulator
AL536_RS31165 (AL536_08385)	rsmC	168404..169426 (-)	1023	WP_020332026.1	16S rRNA (guanine(1207)-N(2))-methyltransferase RsmC	-
AL536_RS31170 (AL536_08390)	-	169511..170596 (-)	1086	WP_061056163.1	AI-2E family transporter	-
AL536_RS45460	-	170633..170791 (+)	159	WP_154184033.1	hypothetical protein	-
AL536_RS31175 (AL536_08395)	hemL	170861..172153 (-)	1293	WP_061056164.1	glutamate-1-semialdehyde 2,1-aminomutase	-
AL536_RS31180 (AL536_08400)	erpA	172462..172803 (+)	342	WP_020332030.1	iron-sulfur cluster insertion protein ErpA	-

Sequence

Protein

• Length: 1129 a.a.
• Molecular weight: 127845.51 Da
• Isoelectric Point: 6.4908

>NTDB_id=167682 AL536_RS31160 WP_061056162.1 164810..168199(-) (chiS) [Vibrio fluvialis strain ATCC 33809]
MFRFNRKQKFKRLQNTLMLAFLVLSITPLTVTAIFFLQSHSKDLQEQSTSHLLSVRDTKQQQVIDYLTAKESEVMGFVRS
ELAYASGGRFYGLVNAFQRLGVDIVQAREHAQQRYVPGSGDQIKTSVLPESSSYVGSERYRLLHKRYHWAYMELLKRSDF
DDILLVDINGNVVYSIFKNANYGTNLLTGKFKDSNLGQTFRQLEQQVSEHRKTNEDYTPVVLSDFVDENGRQYAWMGAPI
IQQGYLHSYAMFRLPNNGITKLIADTNSTSSMRTLLVGQDHRSRTLAYEQPEIDKSTQVIDWALNGSRSVGTYTNQAGEK
TIAAYAPINLKDLHWALVVELPEKEAFARVRQLEKLFIFAMLTAIILVVIASHYLSNFITSPLLKLTWAAERVSAGDLDE
TMINTDRRDEIGRLAVSFERMQRSIREKMQLIKAQNKELESNIQIIRKQNDELQLANKLKDEFLATTSHELRTPLHGMIG
IAEALISGANGPINAAHKYQLDIIISSGQRLATLVDDLLDYHKMRYGNLDINRTAVNLSNATRLVLELSNHLLGKKPIRI
INQVAENPVWVSADAQRLEQVLYNLIGNAIKYTSEGKIVISANQVDNHIRVQVVDTGQGIPAEQLEHIFEPLIQAGHDTS
RYRQGAGLGLSISRQLIELMHGSLYVSSQPMVGTTFSFTLPIASEQEIAAAQLTQLPHFQAPEFTELDLPENHSIPENPN
GPLLLVADDEPVNLRVLDSFLRLEGYRVRTAQDGNEVLKAVAEEKPELLLLDIMMPGMSGYQVCEELRKTYDHAQLPVIM
LTALNQTDDRVRGFEAGANDYLSKPFNKQELAARIIAHLTASKAEQRRIENAELQKELKHRAMVEASLLETQGRLLEQLE
SAPEAIVCIREDHKIRFANEAASRLFKRSQEQIKRSNADELIAPKYLLVEQEHYCGNVDIFVDDIRQHVNADVLRLPEGA
GLQAMYIFNVGGSINAARIHNLETAVEALSSYAFEGDKDKLQQLKELGGEFTRLADKASGDSQSKQDLMRAVLVDAMTSA
LNYWEKVSGQSKFTFAEQSGLWRVYLDRSTLQTRTLDKYLRIETLPKTPRWRTVLNSLDYILDHCQEQGPERTYIEVQRD
KLQKLLTSE

Nucleotide

• Length: 3390 bp

>NTDB_id=167682 AL536_RS31160 WP_061056162.1 164810..168199(-) (chiS) [Vibrio fluvialis strain ATCC 33809]
ATGTTTAGGTTCAATCGGAAGCAAAAGTTTAAGCGCCTGCAGAATACTCTTATGCTGGCGTTCCTGGTTCTCAGCATCAC
CCCTCTGACGGTGACGGCAATCTTTTTCCTTCAATCTCACAGTAAAGACTTGCAGGAACAAAGCACATCGCATCTTCTGT
CAGTGCGGGATACCAAACAGCAGCAAGTAATCGACTACCTCACGGCTAAAGAGTCTGAAGTGATGGGCTTTGTCCGCTCA
GAACTTGCTTACGCCAGTGGCGGTCGCTTCTATGGATTGGTCAACGCATTTCAGCGCTTGGGAGTCGATATCGTTCAGGC
GCGCGAGCATGCGCAGCAACGTTATGTACCGGGTTCCGGCGACCAAATCAAAACCTCCGTGTTACCAGAGTCGAGCAGTT
ACGTCGGCAGCGAACGCTATCGCTTGTTGCATAAACGCTACCACTGGGCGTATATGGAACTGCTTAAGCGTTCCGATTTT
GACGATATTCTGTTGGTCGATATCAACGGAAACGTGGTGTATTCCATTTTTAAAAATGCCAACTACGGCACCAATCTGCT
GACGGGAAAATTTAAAGACAGTAATCTGGGTCAAACCTTCCGCCAACTAGAACAGCAGGTCAGCGAACACCGTAAAACCA
ATGAAGATTACACCCCTGTCGTACTGTCTGATTTTGTTGATGAAAATGGCCGTCAATATGCGTGGATGGGCGCACCAATC
ATTCAGCAAGGCTACTTGCACAGTTATGCGATGTTCCGCCTGCCCAATAATGGCATTACCAAGCTGATTGCAGATACCAA
CAGCACCTCTTCAATGCGCACTCTGTTGGTCGGCCAGGATCATCGCTCGCGTACCCTCGCTTACGAGCAACCAGAGATCG
ATAAGAGTACTCAAGTGATTGATTGGGCGCTGAACGGCAGTCGTTCTGTTGGCACTTATACTAATCAGGCCGGGGAAAAA
ACCATCGCCGCTTACGCCCCTATCAACCTCAAAGATTTGCATTGGGCACTGGTGGTTGAACTACCAGAAAAAGAGGCCTT
TGCGCGCGTCCGTCAGTTGGAGAAGCTGTTCATCTTTGCCATGCTGACCGCAATTATTTTGGTGGTGATCGCCTCACATT
ATCTGTCTAACTTCATTACATCTCCGCTCCTTAAACTGACCTGGGCAGCGGAGCGTGTCTCCGCTGGCGACTTGGATGAA
ACCATGATCAACACCGATCGGCGTGATGAAATTGGTCGGTTGGCGGTGAGTTTTGAACGTATGCAACGCTCTATTCGCGA
GAAGATGCAACTGATTAAGGCGCAGAATAAAGAGTTGGAAAGCAATATTCAGATCATTCGTAAACAGAACGATGAATTGC
AGTTGGCCAACAAACTGAAAGATGAGTTTCTCGCCACAACTTCGCATGAACTCAGAACGCCTTTACATGGCATGATCGGT
ATTGCCGAGGCGCTGATTTCCGGCGCCAATGGTCCAATTAATGCGGCACACAAGTATCAGCTCGACATTATCATCAGTAG
CGGTCAACGACTGGCCACTTTGGTGGATGACTTGCTCGACTACCACAAAATGCGCTACGGCAATCTCGACATCAACAGGA
CTGCGGTTAATCTGTCCAATGCCACGCGTTTGGTGCTGGAACTGTCTAATCATCTGTTGGGCAAAAAGCCAATCCGCATT
ATTAACCAAGTCGCCGAAAATCCGGTGTGGGTATCTGCCGATGCCCAGCGTTTGGAACAGGTGTTGTATAACCTGATCGG
CAACGCCATCAAATACACCTCGGAAGGTAAGATTGTCATCTCAGCCAATCAAGTGGATAACCATATTCGCGTTCAGGTCG
TGGATACCGGGCAAGGTATTCCGGCCGAACAGCTGGAACACATTTTTGAACCTCTGATTCAAGCCGGACATGACACTAGC
CGCTATCGTCAGGGGGCAGGACTGGGACTCTCCATCAGCCGTCAGTTAATTGAGTTGATGCATGGCTCGCTGTATGTCAG
CAGCCAACCTATGGTTGGCACTACCTTTAGTTTCACCCTGCCAATCGCGTCAGAACAAGAGATTGCTGCCGCACAACTGA
CGCAGCTACCCCATTTCCAGGCTCCTGAATTTACGGAACTGGATCTGCCTGAGAATCATAGCATTCCGGAAAATCCGAAC
GGCCCACTGCTGTTAGTCGCGGATGATGAGCCGGTTAACTTACGTGTTCTGGACAGCTTCCTGCGTTTAGAAGGCTATCG
TGTACGCACCGCACAGGATGGCAATGAAGTGTTGAAAGCTGTGGCTGAAGAGAAACCAGAGCTGCTATTACTCGACATCA
TGATGCCCGGTATGAGCGGTTATCAGGTTTGTGAAGAGCTGCGTAAAACGTATGATCACGCTCAATTACCAGTAATTATG
CTGACCGCTCTGAATCAAACCGACGATCGCGTACGAGGCTTTGAAGCGGGTGCCAACGACTACCTGTCCAAACCTTTCAA
CAAACAGGAACTGGCTGCACGTATTATCGCGCACCTGACAGCAAGCAAAGCAGAACAACGTCGGATTGAAAACGCCGAGT
TGCAGAAAGAATTGAAGCACCGCGCGATGGTTGAGGCCAGTTTGCTGGAAACACAAGGACGTTTGTTGGAACAGCTGGAA
TCGGCACCGGAAGCCATTGTTTGTATTCGTGAAGATCACAAAATCCGCTTTGCCAATGAAGCTGCTTCGCGCCTGTTTAA
ACGCAGTCAGGAGCAAATCAAGCGTTCTAACGCAGATGAGTTGATCGCTCCGAAGTATCTGCTGGTCGAACAGGAACATT
ATTGCGGCAACGTCGATATTTTTGTTGATGATATTCGGCAACACGTCAATGCTGATGTCCTCCGTCTGCCAGAAGGCGCC
GGATTACAGGCAATGTATATCTTTAATGTGGGTGGCAGCATTAACGCTGCGCGTATTCATAACCTTGAAACCGCCGTTGA
AGCCCTGTCGAGCTATGCCTTTGAAGGCGACAAGGATAAGCTGCAGCAACTCAAAGAACTGGGGGGAGAATTTACCCGTC
TGGCAGACAAAGCCTCAGGTGACAGCCAATCTAAGCAGGACTTGATGCGCGCCGTCTTGGTGGATGCGATGACATCAGCC
CTCAACTATTGGGAGAAAGTCTCCGGGCAAAGCAAATTCACGTTCGCAGAACAAAGTGGGTTATGGCGCGTCTATCTGGA
CCGAAGCACGCTGCAGACCCGCACACTCGACAAGTATCTGCGTATCGAAACACTGCCTAAAACACCGCGGTGGCGCACGG
TACTCAATTCGCTGGATTACATTCTCGACCACTGCCAGGAGCAGGGGCCTGAACGTACCTACATTGAAGTACAACGCGAC
AAACTGCAAAAGCTGCTCACCTCTGAATAA

Domains

Predicted by InterproScan.

• His Kinase A (phospho-acceptor) domain (HisKA) (460-525)

• HAMP domain (HAMP) (375-427)

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (574-682)

• Response regulator receiver domain (Response_reg) (725-835)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
chiS	Vibrio cholerae strain A1552	85.12	100	0.851