Detailed information NTG0167667

Bioinformatically predicted

Overview

• Name: chiS
• Type: Regulator
• Locus tag: AL475_RS17960
• Genome accession: NZ_CP014033
• Coordinates: 2096467..2099856 (-)
• Length: 1129 a.a.
• NCBI ID: WP_104966510.1
• Uniprot ID: -
• Organism: Vibrio fluvialis strain FDAARGOS_100
• Function: chitin sensor (predicted from homology) Competence regulation

Genomic Context

Location: 2091467..2104856

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AL475_RS17945 (AL475_09985)	-	2091922..2092947 (-)	1026	WP_020332022.1	ABC transporter permease	-
AL475_RS17950 (AL475_09990)	-	2092950..2093936 (-)	987	WP_020332023.1	ABC transporter permease	-
AL475_RS17955 (AL475_09995)	-	2094102..2095772 (-)	1671	WP_020332024.1	ABC transporter substrate-binding protein	-
AL475_RS17960 (AL475_10000)	chiS	2096467..2099856 (-)	3390	WP_104966510.1	response regulator	Regulator
AL475_RS17965 (AL475_10005)	rsmC	2100061..2101083 (-)	1023	WP_104966511.1	16S rRNA (guanine(1207)-N(2))-methyltransferase RsmC	-
AL475_RS17970 (AL475_10010)	-	2101168..2102253 (-)	1086	WP_104966512.1	AI-2E family transporter	-
AL475_RS23035	-	2102290..2102448 (+)	159	WP_154184033.1	hypothetical protein	-
AL475_RS17975 (AL475_10015)	hemL	2102517..2103809 (-)	1293	WP_032082210.1	glutamate-1-semialdehyde 2,1-aminomutase	-
AL475_RS17980 (AL475_10020)	erpA	2104118..2104459 (+)	342	WP_020332030.1	iron-sulfur cluster insertion protein ErpA	-

Sequence

Protein

• Length: 1129 a.a.
• Molecular weight: 127823.37 Da
• Isoelectric Point: 6.3806

>NTDB_id=167667 AL475_RS17960 WP_104966510.1 2096467..2099856(-) (chiS) [Vibrio fluvialis strain FDAARGOS_100]
MFRFNRKQKFKRLQNTLMLAFLVLSITPLTVTAIFFLQSHSKDLQEQSTSHLLSVRDTKQQQVIDYLTAKESEVMGFVRS
ELAYASGGRFYGLVNAFQRLGVDIDQAREHAQQRYVPGSGDQIKTSVLPESSSYVGSERYRLLHKRYHWAYMELLKRSDF
DDILLVDINGNVVYSIFKNANYGTNLLTGKFKDSNLGQTFRQLEQQVSEHRKTNEDYTPVVLSDFVDENGRQYAWMGAPI
IQQGYLHSYAMFRLPNNGITKLIADTNSTSSMRTLLVGQDHRSRTLAYEQPEIDKSTQVIDWALNGSRSVGTYTNQAGEK
TIAAYAPINLKDLHWALVVELPEKEAFARVRQLEKLFIFAMLTAIILVVIASHYLSNFITSPLLKLTWAAERVSAGDLDE
TMINTERRDEIGRLAVSFERMQRSIREKMQLIKAQNKELESNIQVIRKQNDELQLANKLKDEFLATTSHELRTPLHGMIG
IAEALISGANGPINAAHKYQLDIIISSGQRLATLVDDLLDYHKMRYGNLDINTTAVNLSNATRLVLELSNHLLGKKPIRI
INQVAENPVWVSADAQRLEQVLYNLIGNAIKYTSEGKIVISANQVDNHIRVQVVDTGQGIPAEQLEHIFEPLIQAGHDTS
RYRQGAGLGLSISRQLIELMHGSLYVSSQPMVGTTFSFTLPIASEQEIAAAQLTQLPHFQAPEFTELDLPENHSIPENQN
GPLLLVADDEPVNLRVLDSFLRLEGYRVRTAQDGNEVLKAVAEEKPELLLLDIMMPGMSGYQVCEELRKTYDHAQLPVIM
LTALNQTDDRVRGFEAGANDYLSKPFNKQELAARIIAHLTASKAEQRRIENAELQKELKHRAMVEASLLETQGRLLEQLE
SAPEAIVCIREDHKIRFANEAASRLFKRSQEQIKRSNADELIAPKYLLVEQDHYCGNVDIFVDDIRQHVNADVLRLPEGA
GLQAMYIFNVGGSINAARIHNLETAVEALSSYAFEGDKDKLQQLKELGGEFTRLADKASGDSQSKQDLMRAVLVDAMTSA
LNYWEKVSGQSKFTFAEQSGLWRVYLDRSTLQTRTLDKYLRIETLPKTPRWRTVLNSLDYILDHCQEQGPERTYIEVQRD
KLQKLLTSE

Nucleotide

• Length: 3390 bp

>NTDB_id=167667 AL475_RS17960 WP_104966510.1 2096467..2099856(-) (chiS) [Vibrio fluvialis strain FDAARGOS_100]
ATGTTTAGGTTCAATCGGAAGCAAAAGTTTAAGCGCCTGCAGAATACTCTTATGCTGGCGTTCCTGGTTCTCAGCATCAC
CCCTCTGACGGTGACGGCAATCTTTTTCCTTCAATCTCACAGTAAAGACTTGCAGGAACAAAGCACATCGCACCTTCTGT
CAGTACGGGATACCAAACAGCAGCAAGTAATCGACTACCTCACGGCTAAAGAGTCTGAAGTGATGGGCTTTGTCCGCTCA
GAACTTGCTTACGCCAGTGGCGGTCGCTTCTATGGATTGGTCAACGCATTTCAACGCTTGGGAGTCGATATCGATCAGGC
GCGCGAGCATGCGCAGCAACGTTATGTGCCCGGTTCCGGCGACCAAATCAAAACCTCCGTGTTACCAGAGTCGAGCAGTT
ACGTCGGCAGCGAACGCTATCGCTTGCTGCATAAACGCTACCACTGGGCGTATATGGAACTGCTTAAGCGATCCGATTTT
GACGATATTCTGTTGGTCGATATCAACGGCAACGTGGTGTATTCCATTTTTAAAAATGCCAACTACGGCACCAACCTGCT
GACGGGAAAATTTAAAGACAGTAATCTGGGTCAAACCTTCCGCCAACTAGAACAGCAAGTCAGCGAACACCGTAAAACTA
ATGAAGATTACACCCCTGTCGTACTGTCTGATTTTGTTGATGAAAATGGCCGTCAGTATGCATGGATGGGTGCACCAATC
ATTCAGCAAGGCTACTTGCACAGTTATGCGATGTTCCGCCTGCCCAATAATGGCATTACCAAGCTGATTGCAGATACCAA
CAGCACCTCTTCAATGCGCACTCTGTTGGTCGGCCAGGATCATCGCTCGCGCACCCTCGCCTACGAGCAACCTGAGATTG
ATAAGAGTACTCAAGTGATTGATTGGGCGCTGAACGGCAGTCGTTCTGTTGGCACTTATACTAATCAGGCCGGGGAAAAA
ACCATCGCCGCCTACGCCCCTATCAACCTCAAAGATTTGCATTGGGCCCTGGTGGTTGAACTACCAGAAAAAGAGGCCTT
TGCGCGCGTTCGTCAGTTGGAGAAGCTGTTCATCTTCGCCATGCTGACCGCAATTATTTTGGTGGTGATCGCCTCACATT
ATCTGTCTAACTTCATTACATCTCCGCTCCTTAAACTGACCTGGGCAGCGGAGCGTGTCTCCGCTGGCGACTTGGATGAA
ACCATGATCAACACCGAACGACGTGATGAAATTGGTCGGTTGGCGGTGAGTTTTGAACGTATGCAACGCTCTATTCGCGA
GAAGATGCAACTGATTAAGGCGCAGAATAAAGAGTTGGAAAGCAATATTCAGGTTATTCGTAAACAGAACGATGAATTGC
AGTTGGCTAACAAACTGAAAGATGAGTTTCTCGCCACAACTTCGCATGAACTCAGAACGCCTTTACATGGCATGATCGGT
ATTGCCGAGGCGCTGATTTCCGGTGCCAATGGCCCAATTAATGCGGCGCACAAGTATCAGCTCGACATTATCATCAGTAG
CGGTCAACGACTGGCCACCTTGGTGGATGACTTGCTCGACTACCACAAGATGCGCTACGGCAATCTCGACATCAACACGA
CTGCCGTTAATCTGTCCAATGCCACTCGTTTGGTGCTCGAACTGTCGAATCATCTGTTGGGCAAAAAGCCAATCCGCATT
ATTAACCAAGTCGCCGAAAATCCGGTGTGGGTATCTGCCGATGCCCAGCGTTTGGAACAGGTGTTGTACAACCTGATCGG
CAACGCCATCAAATACACCTCGGAAGGTAAGATTGTCATCTCAGCCAATCAAGTGGATAACCATATTCGCGTTCAGGTAG
TGGATACCGGCCAAGGCATTCCGGCCGAACAGCTGGAACACATTTTTGAACCTCTGATTCAAGCCGGACATGACACCAGT
CGCTATCGTCAGGGCGCAGGACTGGGGCTCTCCATCAGCCGTCAATTAATTGAGTTGATGCATGGCTCGCTGTATGTCAG
CAGCCAACCTATGGTTGGCACTACCTTTAGTTTCACCCTGCCAATCGCGTCAGAACAAGAGATTGCTGCCGCACAACTGA
CGCAGCTACCCCATTTCCAAGCTCCTGAATTTACGGAACTGGATCTGCCTGAGAATCATAGCATTCCGGAAAATCAGAAC
GGCCCACTGCTGTTAGTCGCTGATGATGAGCCGGTTAACTTACGTGTTCTGGACAGCTTCCTGCGTTTAGAAGGCTATCG
TGTACGCACCGCACAGGATGGCAATGAAGTGTTGAAAGCTGTGGCTGAAGAGAAACCGGAGCTGCTATTGCTCGACATCA
TGATGCCCGGTATGAGTGGTTATCAGGTTTGTGAAGAGCTGCGTAAAACGTATGATCACGCTCAATTACCGGTAATTATG
CTGACCGCTTTGAACCAAACCGACGATCGCGTACGAGGCTTTGAAGCGGGTGCCAACGACTACCTGTCCAAACCTTTCAA
CAAACAGGAACTGGCTGCACGTATTATCGCGCACCTGACAGCGAGCAAAGCAGAACAACGTCGGATTGAAAACGCCGAGT
TGCAGAAAGAATTGAAGCACCGTGCGATGGTTGAGGCTAGTCTGCTGGAAACGCAAGGCCGTTTGTTGGAACAACTGGAA
TCGGCACCGGAAGCCATTGTTTGTATTCGTGAAGATCACAAAATCCGCTTTGCCAATGAAGCCGCTTCGCGCCTGTTTAA
ACGTAGTCAGGAGCAAATCAAACGCTCTAACGCAGATGAGTTGATCGCTCCGAAGTATCTGCTGGTCGAGCAGGATCATT
ATTGTGGCAACGTCGATATTTTTGTCGATGATATTCGACAACATGTCAACGCTGATGTCCTCCGCCTGCCGGAAGGCGCT
GGATTACAGGCAATGTATATCTTTAATGTGGGTGGCAGCATTAACGCTGCGCGTATTCATAATCTTGAAACCGCCGTTGA
AGCCCTATCGAGCTATGCCTTTGAAGGTGACAAGGATAAGCTGCAGCAACTCAAAGAACTGGGGGGAGAATTTACCCGCC
TGGCGGACAAAGCCTCAGGCGACAGTCAATCTAAGCAGGACTTGATGCGCGCCGTCTTGGTGGATGCGATGACGTCAGCC
CTCAACTATTGGGAAAAAGTCTCCGGGCAAAGCAAATTCACGTTCGCAGAACAAAGTGGGTTATGGCGCGTCTATCTGGA
CCGAAGCACGCTGCAGACCCGCACACTCGACAAGTATCTGCGTATCGAAACACTGCCTAAAACACCGCGGTGGCGCACGG
TACTCAATTCGCTGGATTACATTCTCGACCACTGTCAGGAGCAGGGGCCTGAACGTACCTACATTGAAGTACAACGCGAC
AAACTGCAAAAGCTGCTCACCTCTGAATAA

Domains

Predicted by InterproScan.

• HAMP domain (HAMP) (375-427)

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (574-682)

• His Kinase A (phospho-acceptor) domain (HisKA) (460-525)

• Response regulator receiver domain (Response_reg) (725-835)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
chiS	Vibrio cholerae strain A1552	84.942	100	0.849