Detailed information NTG0167656

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: AL475_RS16475
• Genome accession: NZ_CP014033
• Coordinates: 1787502..1788509 (+)
• Length: 335 a.a.
• NCBI ID: WP_020429332.1
• Uniprot ID: A0AAX2LJL2
• Organism: Vibrio fluvialis strain FDAARGOS_100
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 1782502..1793509

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AL475_RS16455 (AL475_08495)	metJ	1782649..1782966 (+)	318	WP_020329393.1	met regulon transcriptional regulator MetJ	-
AL475_RS16460 (AL475_08500)	-	1783043..1784320 (-)	1278	WP_024373675.1	malic enzyme-like NAD(P)-binding protein	-
AL475_RS16465 (AL475_08505)	rpmE	1784532..1784750 (-)	219	WP_020329395.1	50S ribosomal protein L31	-
AL475_RS16470 (AL475_08510)	priA	1784996..1787197 (+)	2202	WP_044362392.1	primosomal protein N'	-
AL475_RS16475 (AL475_08515)	cytR	1787502..1788509 (+)	1008	WP_020429332.1	DNA-binding transcriptional regulator CytR	Regulator
AL475_RS16480 (AL475_08520)	ftsN	1788639..1789196 (+)	558	WP_024373673.1	cell division protein FtsN	-
AL475_RS16485 (AL475_08525)	hslV	1789332..1789886 (+)	555	WP_104966425.1	ATP-dependent protease subunit HslV	-
AL475_RS16490 (AL475_08530)	hslU	1789928..1791259 (+)	1332	WP_020329400.1	HslU--HslV peptidase ATPase subunit	-
AL475_RS16495 (AL475_08535)	-	1791348..1792265 (+)	918	WP_075988060.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
AL475_RS16500 (AL475_08540)	rraA	1792341..1792868 (+)	528	WP_020329402.1	ribonuclease E activity regulator RraA	-

Sequence

Protein

• Length: 335 a.a.
• Molecular weight: 36914.45 Da
• Isoelectric Point: 6.3516

>NTDB_id=167656 AL475_RS16475 WP_020429332.1 1787502..1788509(+) (cytR) [Vibrio fluvialis strain FDAARGOS_100]
MATMKDVAQLAGVSTATVSRALMNPEKVSASTRKRVEEAVLEAGYSPNSLARNLRRNESKTIVAIVPDICDPYYTEIIRG
IEDAAMEHGYLVLLGDSGQQKKRESSFVNLVFTKQADGMLLLGTDLPFDVSKPEQKNLPPMVMACEFAPELELPTVHIDN
LTSAFEAVNYLTQMGHKRVAQIAGPEAAVLCQFRQQGYQQALRRAGITRNPTYSMSGDFTFESGAKAVRQLLALPEPPTA
IFCHNDTMAIGAIQEAKRLGLRVPQDLSVVGFDDIQFAQYCDPPLTTISQPRYEIGRQAMLMMLELLRGHDVRAGSRLLE
TQLVVRESAAPPRSM

Nucleotide

• Length: 1008 bp

>NTDB_id=167656 AL475_RS16475 WP_020429332.1 1787502..1788509(+) (cytR) [Vibrio fluvialis strain FDAARGOS_100]
ATGGCGACAATGAAGGATGTTGCCCAGCTTGCAGGCGTTTCGACGGCGACGGTCTCGCGCGCTCTGATGAATCCCGAAAA
AGTTTCAGCCTCAACCCGTAAGCGGGTCGAGGAGGCAGTTTTAGAAGCTGGCTATTCACCGAATTCTTTGGCCCGAAATC
TGCGCCGCAATGAGTCAAAAACCATTGTCGCGATAGTGCCGGACATCTGTGACCCTTATTACACAGAGATCATTCGTGGT
ATCGAAGATGCTGCAATGGAACACGGTTATCTGGTGCTGCTGGGCGACAGCGGACAGCAGAAAAAACGTGAAAGCTCATT
TGTGAACCTGGTGTTTACCAAACAAGCGGACGGCATGTTACTGCTGGGGACTGACTTGCCGTTTGATGTGAGCAAACCTG
AGCAAAAAAACCTGCCACCGATGGTGATGGCGTGTGAGTTTGCGCCGGAGCTTGAGCTACCCACGGTGCACATTGATAAC
CTGACATCGGCGTTTGAAGCCGTGAACTATCTGACTCAGATGGGGCACAAGCGCGTGGCACAAATCGCCGGACCGGAAGC
GGCGGTACTGTGTCAGTTCCGTCAGCAAGGTTATCAGCAGGCGCTGCGTCGTGCGGGTATCACTCGCAATCCGACCTACA
GTATGAGTGGTGACTTTACTTTTGAGTCCGGAGCCAAAGCGGTGCGTCAATTATTGGCCCTGCCTGAGCCTCCGACAGCT
ATCTTCTGTCACAACGATACCATGGCGATTGGTGCGATTCAGGAAGCGAAACGTCTGGGACTGCGCGTGCCGCAGGATCT
CTCTGTGGTGGGCTTTGATGACATTCAATTCGCCCAGTACTGCGATCCACCGCTGACGACCATCTCTCAGCCTCGCTACG
AGATTGGCCGTCAGGCGATGCTGATGATGCTGGAATTGCTGCGTGGTCATGACGTGCGTGCCGGTTCTCGTCTACTGGAA
ACTCAGCTGGTGGTGCGTGAAAGTGCGGCGCCGCCTCGCTCGATGTAA

Domains

Predicted by InterproScan.

• Bacterial regulatory proteins, lacI family (LacI) (3-48)

• Periplasmic binding protein-like domain (Peripla_BP_3) (168-328)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio cholerae C6706	94.277	99.104	0.934
cytR	Vibrio parahaemolyticus RIMD 2210633	90.691	99.403	0.901