Detailed information    

insolico Bioinformatically predicted

Overview

Name   sxy/tfoX   Type   Regulator
Locus tag   AL511_RS23010 Genome accession   NZ_CP014029
Coordinates   4657300..4657923 (+) Length   207 a.a.
NCBI ID   WP_026612357.1    Uniprot ID   A0AAW9LN46
Organism   Klebsiella aerogenes strain FDAARGOS_152     
Function   positive regulator of competence gene (predicted from homology)   
Competence regulation

Genomic Context

Location: 4652300..4662923
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AL511_RS22990 (AL511_21695) - 4652449..4654206 (-) 1758 WP_032705615.1 AAA family ATPase -
  AL511_RS22995 (AL511_21700) matP 4654392..4654844 (+) 453 WP_015367432.1 macrodomain Ter protein MatP -
  AL511_RS23000 (AL511_21705) ompA 4654936..4655988 (-) 1053 WP_080473199.1 porin OmpA -
  AL511_RS23005 (AL511_21710) sulA 4656341..4656850 (-) 510 WP_020079240.1 SOS-induced cell division inhibitor SulA -
  AL511_RS23010 (AL511_21715) sxy/tfoX 4657300..4657923 (+) 624 WP_026612357.1 TfoX/Sxy family DNA transformation protein Regulator
  AL511_RS23015 (AL511_21720) yccS 4657911..4660046 (-) 2136 WP_015367427.1 YccS family putative transporter -
  AL511_RS23020 (AL511_21725) - 4660064..4660510 (-) 447 WP_015367426.1 YccF domain-containing protein -
  AL511_RS23025 (AL511_21730) helD 4660634..4662688 (+) 2055 WP_015367425.1 DNA helicase IV -

Sequence

Protein


Download         Length: 207 a.a.        Molecular weight: 23612.33 Da        Isoelectric Point: 10.0181

>NTDB_id=167576 AL511_RS23010 WP_026612357.1 4657300..4657923(+) (sxy/tfoX) [Klebsiella aerogenes strain FDAARGOS_152]
MKKISKLRFLQFQECLSPLGKISSRPLFGGYSLAIENTVFAMVAEGEIYLRVCEQSASYRVEHHSPMLMMRKNGRPVALK
YYRIDEALWQDSKMLFHLSQLSLHSARSEKQHQRDSGRLKNLPNISFHMELMLIHAGITDVKMLRTLGAEKSWLKLREHN
KGISINVLESLAGAIAGIHSAALPAQRRQELREWANTQGYSVEDYSG

Nucleotide


Download         Length: 624 bp        

>NTDB_id=167576 AL511_RS23010 WP_026612357.1 4657300..4657923(+) (sxy/tfoX) [Klebsiella aerogenes strain FDAARGOS_152]
ATGAAGAAAATTTCAAAATTACGGTTCCTCCAGTTTCAGGAGTGCCTTTCCCCCTTAGGTAAAATCAGTAGCCGGCCTTT
ATTCGGCGGGTATAGTCTGGCGATTGAAAATACCGTATTCGCCATGGTGGCTGAGGGCGAAATCTATCTTAGGGTTTGCG
AACAAAGCGCCTCTTATCGGGTTGAACATCACAGCCCGATGCTGATGATGCGCAAGAATGGCCGGCCAGTGGCCTTAAAG
TATTACCGGATAGATGAAGCACTATGGCAGGACAGTAAAATGCTGTTTCACCTATCGCAGCTGTCATTGCATTCGGCGCG
AAGCGAAAAGCAGCATCAGCGTGATTCCGGCAGACTAAAGAATTTGCCTAATATCAGCTTCCATATGGAGTTGATGTTGA
TCCATGCCGGAATAACCGATGTGAAAATGCTGCGTACACTCGGGGCGGAAAAGAGCTGGTTAAAATTGAGAGAGCATAAT
AAAGGAATATCAATCAATGTCCTTGAGTCCCTGGCGGGCGCGATTGCCGGCATTCATTCCGCCGCGCTCCCGGCGCAGCG
GCGCCAGGAGCTACGGGAGTGGGCTAATACACAAGGATACAGCGTGGAGGATTATTCCGGTTGA

Domains

Predicted by InterproScan.

TfoX N-terminal domain (TfoX_N)

(14-105)

TfoX C-terminal domain (TfoX_C)

(117-194)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sxy/tfoX Escherichia coli BW25113 strain K-12

51.777

95.169

0.493

Multiple sequence alignment