Detailed information    

insolico Bioinformatically predicted

Overview

Name   treR   Type   Regulator
Locus tag   AL510_RS04430 Genome accession   NZ_CP014027
Coordinates   851794..852507 (-) Length   237 a.a.
NCBI ID   WP_002992823.1    Uniprot ID   -
Organism   Streptococcus pyogenes strain FDAARGOS_149     
Function   regulate expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 846794..857507
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AL510_RS09520 - 846944..847090 (+) 147 WP_002982210.1 hypothetical protein -
  AL510_RS04395 (AL510_04270) - 847119..848054 (+) 936 WP_010922750.1 Gfo/Idh/MocA family protein -
  AL510_RS04400 (AL510_04275) - 848063..848572 (+) 510 WP_011285759.1 GNAT family N-acetyltransferase -
  AL510_RS04405 (AL510_04280) nrdG 848572..849186 (+) 615 WP_002982219.1 anaerobic ribonucleoside-triphosphate reductase activating protein -
  AL510_RS04410 (AL510_04285) yaaA 849360..850091 (-) 732 WP_010922748.1 peroxide stress protein YaaA -
  AL510_RS04415 (AL510_04290) - 850133..850990 (-) 858 WP_010922747.1 VOC family protein -
  AL510_RS04420 (AL510_04295) - 851177..851515 (+) 339 Protein_796 winged helix-turn-helix transcriptional regulator -
  AL510_RS04430 (AL510_04300) treR 851794..852507 (-) 714 WP_002992823.1 trehalose operon repressor Regulator
  AL510_RS04435 (AL510_04305) treP 852718..854742 (+) 2025 WP_010922746.1 PTS system trehalose-specific EIIBC component -
  AL510_RS04440 (AL510_04310) treC 854809..856437 (+) 1629 WP_010922745.1 alpha,alpha-phosphotrehalase -

Sequence

Protein


Download         Length: 237 a.a.        Molecular weight: 27620.79 Da        Isoelectric Point: 9.6307

>NTDB_id=167512 AL510_RS04430 WP_002992823.1 851794..852507(-) (treR) [Streptococcus pyogenes strain FDAARGOS_149]
MTKYERIYKDLETKINKDFYKEGDFLPTEIELSQQYQASRDTVRKALSLLTKAGLILKKQGRGTQVIRHHQIMFPISELT
SYQELVSYSNLDSKTNVIAIDKLIVDETLSKLTGFSKNSLVWRVTRQRVVEGVASVLDIDYLSKTLVPIMTREIAEHSIY
QYLEKELHLAIDFALKEVTIDQITDRDKILLDLGSDQHVVSVKSKVYLSNNNQFQFTESRHKLEKFKFLDFARRRPK

Nucleotide


Download         Length: 714 bp        

>NTDB_id=167512 AL510_RS04430 WP_002992823.1 851794..852507(-) (treR) [Streptococcus pyogenes strain FDAARGOS_149]
ATGACAAAGTATGAACGTATTTATAAAGACCTCGAAACAAAAATAAACAAAGACTTTTACAAAGAAGGGGATTTTTTACC
TACTGAAATAGAATTGAGTCAACAATACCAAGCTAGCCGAGATACCGTCCGCAAGGCTCTCTCACTTCTCACAAAGGCAG
GTCTTATCCTCAAAAAACAAGGACGTGGCACCCAAGTGATTAGACATCATCAGATCATGTTCCCTATCTCAGAACTAACT
AGTTATCAGGAACTCGTCTCTTACTCAAATCTAGATTCTAAGACCAACGTCATTGCCATTGATAAACTGATTGTGGATGA
GACACTTTCAAAATTGACCGGTTTTAGCAAAAACAGCTTGGTCTGGCGTGTTACACGCCAACGCGTTGTTGAGGGTGTGG
CTTCCGTCTTAGACATTGATTACCTTAGTAAAACTTTGGTGCCAATAATGACAAGGGAAATCGCAGAGCATTCTATTTAT
CAATATTTGGAAAAGGAACTCCATCTCGCCATTGACTTTGCCCTCAAAGAGGTTACCATTGACCAAATAACCGATCGTGA
TAAAATTTTACTTGACCTTGGATCAGACCAACATGTTGTTTCCGTCAAATCCAAAGTCTACCTTTCCAATAATAACCAAT
TCCAATTCACCGAGAGTCGCCATAAACTGGAAAAATTTAAATTTTTAGATTTTGCTCGGCGCAGACCAAAATAA

Domains

Predicted by InterproScan.

Bacterial regulatory proteins, gntR family (GntR)

(3-66)

UTRA domain (UTRA)

(91-227)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  treR Streptococcus mutans UA159

68.376

98.734

0.675

Multiple sequence alignment