Detailed information NTG0167501

Bioinformatically predicted

Overview

• Name: comYF
• Type: Machinery gene
• Locus tag: AL510_RS03315
• Genome accession: NZ_CP014027
• Coordinates: 661454..661888 (-)
• Length: 144 a.a.
• NCBI ID: WP_010921800.1
• Uniprot ID: -
• Organism: Streptococcus pyogenes strain FDAARGOS_149
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 656454..666888

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AL510_RS03290 (AL510_03190)	proC	657490..658260 (+)	771	WP_010921805.1	pyrroline-5-carboxylate reductase	-
AL510_RS03295 (AL510_03195)	-	658343..658651 (-)	309	WP_010921804.1	hypothetical protein	-
AL510_RS03300 (AL510_03200)	-	658838..660034 (-)	1197	WP_010921803.1	acetate kinase	-
AL510_RS03305 (AL510_03205)	comYH	660093..661046 (-)	954	WP_010921802.1	class I SAM-dependent methyltransferase	Machinery gene
AL510_RS03310 (AL510_03210)	comGG	661144..661470 (-)	327	WP_010921801.1	competence type IV pilus minor pilin ComGG	-
AL510_RS03315 (AL510_03215)	comYF	661454..661888 (-)	435	WP_010921800.1	competence type IV pilus minor pilin ComGF	Machinery gene
AL510_RS03320 (AL510_03220)	comGE	661881..662165 (-)	285	WP_002987779.1	competence type IV pilus minor pilin ComGE	-
AL510_RS03325 (AL510_03225)	comGD	662122..662550 (-)	429	WP_002986548.1	competence type IV pilus minor pilin ComGD	-
AL510_RS03330 (AL510_03230)	comYC	662525..662851 (-)	327	WP_002986552.1	competence type IV pilus major pilin ComGC	Machinery gene
AL510_RS03335 (AL510_03235)	comYB	662853..663887 (-)	1035	WP_011054115.1	competence type IV pilus assembly protein ComGB	Machinery gene
AL510_RS03340 (AL510_03240)	comYA	663823..664761 (-)	939	WP_010921798.1	competence type IV pilus ATPase ComGA	Machinery gene
AL510_RS03345 (AL510_03245)	-	664854..665219 (-)	366	WP_002986560.1	DUF1033 family protein	-

Sequence

Protein

• Length: 144 a.a.
• Molecular weight: 16654.28 Da
• Isoelectric Point: 10.2526

>NTDB_id=167501 AL510_RS03315 WP_010921800.1 661454..661888(-) (comYF) [Streptococcus pyogenes strain FDAARGOS_149]
MSKQLSNIKAFTLLEALIALLVISGSLLVYQGLTRTLLKHSHYLARHDQDNWLLFSHQLREELSGARFYKVADNKLYVEK
GKKVLAFGQFKSHDFRKSASNGKGYQPMLFGISRSHIHIEQSQICITLKWKSGLERTFYYAFQD

Nucleotide

• Length: 435 bp

>NTDB_id=167501 AL510_RS03315 WP_010921800.1 661454..661888(-) (comYF) [Streptococcus pyogenes strain FDAARGOS_149]
TTGAGTAAACAATTAAGTAACATAAAAGCTTTTACCCTTCTAGAGGCGTTAATAGCCTTACTCGTGATATCAGGGTCTTT
ATTGGTTTATCAAGGTTTGACCCGAACCCTCCTTAAACATAGCCATTATCTAGCCCGTCATGATCAAGATAATTGGCTCT
TATTTTCTCATCAATTGCGAGAGGAGTTAAGTGGAGCAAGGTTTTACAAAGTAGCTGATAATAAACTATACGTTGAAAAA
GGAAAGAAAGTACTAGCTTTTGGCCAATTTAAAAGTCATGATTTTCGAAAATCAGCTAGTAATGGAAAAGGGTATCAACC
CATGTTATTTGGAATATCACGTAGTCATATTCACATAGAGCAGTCACAGATTTGCATTACTTTAAAGTGGAAAAGTGGGT
TAGAAAGGACTTTTTATTATGCCTTTCAAGACTAA

Domains

Predicted by InterproScan.

• Putative Competence protein ComGF (ComGF) (41-135)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comYF	Streptococcus mutans UA140	51.079	96.528	0.493
comYF	Streptococcus mutans UA159	50.36	96.528	0.486
comGF	Lactococcus lactis subsp. cremoris KW2	47.445	95.139	0.451
comGF/cglF	Streptococcus mitis NCTC 12261	44.03	93.056	0.41
comGF/cglF	Streptococcus pneumoniae Rx1	42.857	92.361	0.396
comGF/cglF	Streptococcus pneumoniae D39	42.857	92.361	0.396
comGF/cglF	Streptococcus pneumoniae R6	42.857	92.361	0.396
comGF/cglF	Streptococcus pneumoniae TIGR4	42.857	92.361	0.396
comGF/cglF	Streptococcus mitis SK321	42.105	92.361	0.389