Detailed information    

insolico Bioinformatically predicted

Overview


Name   kpsS   Type   Regulator
Locus tag   BFO62_RS00455 Genome accession   NZ_CP017257
Coordinates   78938..80197 (-) Length   419 a.a.
NCBI ID   WP_049323625.1    Uniprot ID   -
Organism   Neisseria meningitidis strain COL-201504-11     
Function   repress natural transformation (predicted from homology)   
Competence regulation

Genomic Context


Location: 73938..85197
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BFO62_RS12705 (BFO62_00370) - 74248..74397 (-) 150 WP_019742709.1 hypothetical protein -
  BFO62_RS00435 (BFO62_00375) - 74415..74612 (-) 198 WP_002215316.1 hypothetical protein -
  BFO62_RS00440 (BFO62_00380) - 74623..75639 (-) 1017 WP_002216199.1 lysozyme inhibitor LprI family protein -
  BFO62_RS00445 (BFO62_00385) gltS 75738..76952 (-) 1215 WP_002224378.1 sodium/glutamate symporter -
  BFO62_RS00450 (BFO62_00390) - 77170..78576 (-) 1407 WP_076612684.1 tetratricopeptide repeat protein -
  BFO62_RS00455 (BFO62_00395) kpsS 78938..80197 (-) 1260 WP_049323625.1 capsule biosynthesis protein Regulator
  BFO62_RS00460 (BFO62_00400) - 80334..82448 (-) 2115 WP_049323624.1 capsular polysaccharide biosynthesis protein -
  BFO62_RS00465 (BFO62_00405) rfbC 82474..83013 (-) 540 WP_179128829.1 dTDP-4-dehydrorhamnose 3,5-epimerase -
  BFO62_RS00470 (BFO62_00410) rfbA 83067..83933 (-) 867 WP_002224369.1 glucose-1-phosphate thymidylyltransferase RfbA -
  BFO62_RS00475 (BFO62_00415) rffG 83996..85063 (-) 1068 WP_080179623.1 dTDP-glucose 4,6-dehydratase -

Sequence


Protein


Download         Length: 419 a.a.        Molecular weight: 48399.18 Da        Isoelectric Point: 9.6191

>NTDB_id=167458 BFO62_RS00455 WP_049323625.1 78938..80197(-) (kpsS) [Neisseria meningitidis strain COL-201504-11]
MKQPVLQNNLQNLLESAENILLLQGPVGNFFQRLADWLTANGKTVHKFNFNAGDDYFYPPTQAHTVAFNDSYDAFPEFLQ
EYIVQHHIQAVVCFGDTRPYHLLAKRIANENQASFWAFEEGYFRPYYITLEKDGVNAFSPLPRRADFFLEQFPKLARQEY
KAPTPVRGGFTPMAKNAVRYYIELFRNSNKYSNYIHHRASNVGHYLKLWSISILKRLNYYIEDIQIAKRVEAGKYGKFFI
VPLQVFNDSQVRIHCDFSSVRSFLLHVLASFAAHAPADTNLIIKHHPMDRGFIDYSRDIKRFIKKHPKLKGRITYVHDVP
LPVFLRHGLGMVTINSTSGLSGLIHNMPVKVLGRAHYDIPGITDQNTLAEFWNHPTPPDSDLFHAYRMYHLNVTQINGNF
YSQVFFPNKKTSDSSTPTT

Nucleotide


Download         Length: 1260 bp        

>NTDB_id=167458 BFO62_RS00455 WP_049323625.1 78938..80197(-) (kpsS) [Neisseria meningitidis strain COL-201504-11]
ATGAAACAGCCCGTCCTCCAAAACAACCTGCAAAACTTACTTGAAAGCGCAGAAAACATCCTGCTGCTTCAAGGCCCTGT
CGGCAACTTTTTTCAGCGCCTCGCCGACTGGCTGACCGCAAACGGCAAAACCGTGCATAAATTCAACTTTAATGCAGGCG
ACGACTATTTTTATCCGCCTACTCAAGCGCATACCGTTGCTTTTAACGACAGCTACGATGCCTTTCCTGAATTTTTGCAA
GAATACATCGTTCAACATCACATCCAGGCCGTTGTCTGCTTTGGCGACACACGTCCCTACCATCTCCTGGCCAAACGAAT
TGCAAACGAAAACCAAGCCAGTTTCTGGGCGTTTGAAGAAGGCTATTTCCGCCCCTACTACATCACCTTAGAAAAAGACG
GCGTCAACGCATTTTCTCCGTTGCCGCGCCGTGCCGACTTTTTTCTGGAACAATTCCCCAAGCTGGCCCGGCAAGAATAC
AAAGCGCCGACACCGGTACGCGGCGGGTTTACGCCCATGGCCAAAAACGCCGTCCGTTACTATATCGAATTGTTCCGCAA
CTCGAACAAATACTCGAACTACATCCACCACCGCGCATCCAATGTCGGCCATTACCTCAAACTGTGGTCAATCTCCATCC
TCAAGCGTTTGAACTACTATATTGAAGACATCCAAATCGCCAAACGCGTGGAGGCGGGCAAATACGGCAAGTTTTTTATT
GTTCCCTTGCAGGTATTCAACGACAGCCAAGTCCGCATCCATTGCGACTTTTCCAGCGTCCGCAGCTTCCTGCTCCATGT
TTTGGCCTCCTTTGCCGCGCACGCGCCTGCCGATACCAACCTCATCATCAAGCATCATCCGATGGACCGCGGCTTTATCG
ACTACTCGCGCGACATCAAACGCTTTATCAAAAAACACCCCAAACTCAAAGGCCGTATCACTTACGTCCATGATGTCCCC
CTGCCCGTTTTCCTACGTCACGGCCTCGGCATGGTTACCATCAACAGCACCAGCGGCCTGTCCGGCTTGATCCACAACAT
GCCAGTCAAAGTCCTCGGCCGCGCCCATTACGACATTCCCGGCATAACCGACCAAAATACCTTGGCAGAATTTTGGAATC
ATCCGACGCCGCCTGACAGCGACCTGTTCCATGCCTACCGTATGTACCACCTCAACGTAACCCAAATTAACGGCAACTTC
TACAGTCAGGTCTTTTTTCCCAACAAAAAAACCTCTGACTCTTCCACTCCGACAACCTGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kpsS Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819

39.086

94.033

0.368