Detailed information
Bioinformatically predicted
Overview
| Name | pilA | Type | Machinery gene |
| Locus tag | AL533_RS19025 | Genome accession | NZ_CP014019 |
| Coordinates | 3970302..3970739 (+) | Length | 145 a.a. |
| NCBI ID | WP_104919228.1 | Uniprot ID | - |
| Organism | Acinetobacter nosocomialis strain FDAARGOS_129 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 3965302..3975739
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AL533_RS19005 (AL533_19005) | - | 3966694..3967581 (+) | 888 | WP_104919227.1 | metal-dependent hydrolase | - |
| AL533_RS19010 (AL533_19010) | - | 3967714..3968304 (+) | 591 | WP_002051712.1 | LemA family protein | - |
| AL533_RS19015 (AL533_19015) | - | 3968326..3969408 (+) | 1083 | WP_016803749.1 | TPM domain-containing protein | - |
| AL533_RS19020 (AL533_19020) | - | 3969402..3969962 (+) | 561 | WP_016803748.1 | TPM domain-containing protein | - |
| AL533_RS19025 (AL533_19025) | pilA | 3970302..3970739 (+) | 438 | WP_104919228.1 | pilin | Machinery gene |
| AL533_RS19030 (AL533_19030) | - | 3970800..3972110 (+) | 1311 | WP_016803746.1 | O-antigen ligase family protein | - |
| AL533_RS19035 (AL533_19035) | - | 3972221..3973849 (+) | 1629 | WP_017398294.1 | PglL family O-oligosaccharyltransferase | - |
| AL533_RS19040 (AL533_19040) | bfr | 3973890..3974354 (-) | 465 | WP_104919229.1 | bacterioferritin | - |
| AL533_RS19045 (AL533_19045) | - | 3974599..3974793 (-) | 195 | WP_000289091.1 | bacterioferritin-associated ferredoxin | - |
| AL533_RS19050 (AL533_19050) | - | 3975013..3975396 (-) | 384 | WP_002051728.1 | RidA family protein | - |
Sequence
Protein
Download Length: 145 a.a. Molecular weight: 14871.91 Da Isoelectric Point: 7.5911
>NTDB_id=167327 AL533_RS19025 WP_104919228.1 3970302..3970739(+) (pilA) [Acinetobacter nosocomialis strain FDAARGOS_129]
MNAQKGFTLIELMIVVAIIGILAAIAIPAYQNYIAKSQVSTGLTDITAGKANTETKLAEGLTANLTNATDVGLQASSNAC
SSISVSVATTGLTSIECTLQGTSQISGKKISWERTADSATAGTTGIWRCKTDVADNLRPKSCGAS
MNAQKGFTLIELMIVVAIIGILAAIAIPAYQNYIAKSQVSTGLTDITAGKANTETKLAEGLTANLTNATDVGLQASSNAC
SSISVSVATTGLTSIECTLQGTSQISGKKISWERTADSATAGTTGIWRCKTDVADNLRPKSCGAS
Nucleotide
Download Length: 438 bp
>NTDB_id=167327 AL533_RS19025 WP_104919228.1 3970302..3970739(+) (pilA) [Acinetobacter nosocomialis strain FDAARGOS_129]
ATGAATGCACAAAAAGGTTTTACATTAATCGAACTCATGATCGTTGTAGCGATTATTGGTATTTTGGCAGCGATCGCGAT
TCCTGCTTATCAAAACTATATTGCTAAATCTCAAGTAAGTACAGGACTAACTGATATTACCGCTGGTAAAGCTAATACTG
AAACTAAATTAGCAGAAGGTTTAACTGCTAATTTAACAAATGCTACTGATGTAGGCTTGCAAGCTTCAAGCAACGCTTGT
TCTTCAATTAGTGTGTCAGTTGCTACTACTGGATTAACATCAATTGAATGTACATTACAAGGCACTTCACAAATTAGTGG
CAAGAAAATTTCTTGGGAACGAACAGCTGATAGTGCTACAGCAGGGACTACAGGAATATGGCGTTGTAAAACTGATGTAG
CTGATAATTTACGTCCTAAATCATGTGGTGCATCATAA
ATGAATGCACAAAAAGGTTTTACATTAATCGAACTCATGATCGTTGTAGCGATTATTGGTATTTTGGCAGCGATCGCGAT
TCCTGCTTATCAAAACTATATTGCTAAATCTCAAGTAAGTACAGGACTAACTGATATTACCGCTGGTAAAGCTAATACTG
AAACTAAATTAGCAGAAGGTTTAACTGCTAATTTAACAAATGCTACTGATGTAGGCTTGCAAGCTTCAAGCAACGCTTGT
TCTTCAATTAGTGTGTCAGTTGCTACTACTGGATTAACATCAATTGAATGTACATTACAAGGCACTTCACAAATTAGTGG
CAAGAAAATTTCTTGGGAACGAACAGCTGATAGTGCTACAGCAGGGACTACAGGAATATGGCGTTGTAAAACTGATGTAG
CTGATAATTTACGTCCTAAATCATGTGGTGCATCATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilA | Acinetobacter baumannii strain A118 |
49.66 |
100 |
0.503 |
| pilA/pilAI | Pseudomonas stutzeri DSM 10701 |
44.681 |
97.241 |
0.434 |
| pilA | Vibrio cholerae O1 biovar El Tor strain E7946 |
41.497 |
100 |
0.421 |
| pilA | Vibrio cholerae strain A1552 |
41.497 |
100 |
0.421 |
| pilA | Vibrio cholerae C6706 |
41.497 |
100 |
0.421 |
| comP | Acinetobacter baylyi ADP1 |
40.667 |
100 |
0.421 |
| pilA/pilAII | Pseudomonas stutzeri DSM 10701 |
42.958 |
97.931 |
0.421 |
| pilA | Pseudomonas aeruginosa PAK |
38.312 |
100 |
0.407 |