Detailed information    

insolico Bioinformatically predicted

Overview

Name   priA   Type   Machinery gene
Locus tag   AL533_RS15585 Genome accession   NZ_CP014019
Coordinates   3240951..3243179 (+) Length   742 a.a.
NCBI ID   WP_104919111.1    Uniprot ID   A0A2L1VKI5
Organism   Acinetobacter nosocomialis strain FDAARGOS_129     
Function   DNA puliing through the inner membrane (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 3235951..3248179
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AL533_RS15560 (AL533_15560) lnt 3236337..3237896 (+) 1560 WP_104919110.1 apolipoprotein N-acyltransferase -
  AL533_RS15565 (AL533_15565) - 3237898..3238236 (-) 339 WP_032030925.1 tRNA-binding protein -
  AL533_RS15570 (AL533_15570) - 3238381..3238725 (-) 345 WP_000643174.1 hypothetical protein -
  AL533_RS15575 (AL533_15575) gspG 3238992..3239573 (-) 582 WP_000865317.1 type II secretion system major pseudopilin GspG -
  AL533_RS15580 (AL533_15580) gspF 3239597..3240802 (-) 1206 WP_001112089.1 type II secretion system inner membrane protein GspF -
  AL533_RS15585 (AL533_15585) priA 3240951..3243179 (+) 2229 WP_104919111.1 primosomal protein N' Machinery gene
  AL533_RS15590 (AL533_15590) - 3243255..3245096 (+) 1842 WP_004710778.1 monovalent cation:proton antiporter-2 (CPA2) family protein -
  AL533_RS15595 (AL533_15595) - 3245262..3246137 (+) 876 WP_004710781.1 Hsp33 family molecular chaperone HslO -
  AL533_RS15600 (AL533_15600) - 3246274..3246885 (+) 612 WP_002157001.1 LysE family translocator -
  AL533_RS15605 (AL533_15605) - 3247035..3247994 (+) 960 WP_083009311.1 DnaJ C-terminal domain-containing protein -

Sequence

Protein


Download         Length: 742 a.a.        Molecular weight: 84063.90 Da        Isoelectric Point: 8.5597

>NTDB_id=167309 AL533_RS15585 WP_104919111.1 3240951..3243179(+) (priA) [Acinetobacter nosocomialis strain FDAARGOS_129]
MTITPKPDSVVYRVRVAVPVHLYDTFDYTLTKAQYERAQVGSRVAISFGRQNLIGIITEKVDPQESFTGHFQLKAISELL
DDEPILDEQVLNLLTWSAQYYQFPIGEVMQTALPALLRQGKPMDVLFHLWKIIPCDNAEALLKRSIKQQDAYQILKLHPT
GTTENILNLSGVETATLKALQKKGLIDCTLEPHDFSPAPVQLAQMPLTLNDDQKKATQHVINAQHQYQAFLLDGLTGSGK
TEVYLHIMHEVLKQGKQVLVLVPEIGLTPQTISRFKSRFNCDIALLHSGLNDSKRLQAWQQAQTGKASIILGTRSAIYTP
LPRLGLIILDEEHDLSYKQQEGFRYHARDVALYRGHLQGCPVILGSATPSIDSYYLVETGKLTSLQLNQRAGHALLPKMH
LIDLKIVKKQHGISQPLIEQIKNTLARKEQVLIFLNRRGYAPVLVCESCGWQANCPHCDAHFTLHTQPYSYLHCHHCGTV
HRLPDHCPECQQKSLKTLGAGTAKVEEHLQELFPDYDVIRVDRDSTSRVGSWQKIYDRIHQNKPTILLGTQMLAKGHHFP
HVTLVAILDIDAGLLSVDIRAPERTAQLIVQVAGRAGRGEHKGHVYLQTLRPDHPLLTTLIEKDYRAVAKQTLAERKVAL
LPPYRYAVLIRAESKDRDYTLHFLNEAAEQLRQIAGDIVDIWGPIPAPMERKAGRYRAHMVILSADRARLHFYLRQWWAQ
LVHAQRQHQLRLSIDVDPQEFS

Nucleotide


Download         Length: 2229 bp        

>NTDB_id=167309 AL533_RS15585 WP_104919111.1 3240951..3243179(+) (priA) [Acinetobacter nosocomialis strain FDAARGOS_129]
ATGACCATAACGCCAAAGCCTGATTCAGTTGTTTATCGTGTGCGTGTTGCCGTACCTGTGCATCTGTACGACACTTTTGA
CTATACACTCACCAAAGCACAATATGAACGGGCTCAAGTAGGTTCACGCGTCGCAATTTCATTTGGACGGCAAAACCTGA
TTGGTATCATTACTGAAAAAGTTGACCCACAAGAATCATTTACAGGTCACTTTCAGCTTAAGGCCATTTCTGAACTTTTA
GATGATGAGCCTATTTTAGATGAACAAGTTTTAAATTTATTGACATGGTCAGCACAATATTACCAATTTCCGATTGGCGA
GGTGATGCAGACTGCTTTACCTGCGTTATTGCGTCAGGGCAAACCCATGGATGTTTTATTTCATCTATGGAAAATCATTC
CATGTGACAATGCCGAAGCTTTACTAAAACGTTCAATCAAACAGCAAGATGCTTATCAAATTTTAAAATTGCACCCTACA
GGTACTACAGAAAATATTCTTAATTTAAGTGGCGTAGAAACGGCTACACTCAAAGCACTTCAAAAGAAGGGGCTAATAGA
CTGTACACTTGAGCCTCATGACTTTAGCCCAGCACCTGTGCAATTGGCTCAAATGCCACTCACATTAAATGATGACCAAA
AGAAAGCAACTCAGCACGTCATTAATGCACAGCATCAATACCAAGCATTTTTACTAGATGGCTTAACTGGAAGTGGTAAA
ACTGAAGTTTATTTGCACATCATGCATGAGGTGCTAAAGCAAGGTAAGCAAGTACTGGTGTTAGTGCCTGAAATTGGTTT
AACCCCTCAAACCATTTCGCGCTTTAAGTCTCGTTTTAACTGTGATATTGCTCTATTACATTCAGGCTTAAATGACTCTA
AACGCTTACAAGCATGGCAACAAGCACAGACTGGAAAGGCCTCTATTATTTTAGGAACACGTTCAGCTATTTATACCCCG
CTGCCACGTTTGGGCCTGATCATTTTAGATGAAGAACACGACCTCTCTTACAAACAGCAAGAAGGTTTCCGTTACCATGC
TCGTGATGTCGCGCTTTATCGGGGCCACTTACAAGGCTGCCCTGTTATTTTAGGTTCAGCGACCCCAAGCATTGACAGTT
ATTACTTAGTAGAAACTGGCAAGTTAACTTCACTGCAACTTAACCAACGTGCAGGCCATGCGCTTTTACCTAAAATGCAT
TTGATTGACCTTAAAATTGTCAAAAAGCAGCATGGAATTAGCCAGCCTTTAATCGAGCAGATTAAAAATACGCTAGCAAG
AAAAGAACAGGTTTTAATCTTTTTAAACCGTCGTGGCTATGCGCCTGTACTTGTGTGTGAAAGTTGTGGATGGCAAGCAA
ATTGTCCACATTGCGATGCGCATTTTACGTTGCATACTCAGCCTTATTCTTATTTACATTGTCACCACTGCGGTACGGTT
CATCGCTTGCCAGACCACTGCCCTGAGTGTCAGCAGAAAAGTTTAAAAACTTTAGGTGCCGGAACAGCCAAAGTTGAAGA
ACACTTACAAGAACTATTTCCAGACTATGATGTGATTCGGGTTGACCGTGACAGTACCAGCCGTGTCGGTAGTTGGCAAA
AAATTTATGACCGTATTCATCAAAACAAACCAACAATTTTGCTCGGTACTCAAATGTTGGCAAAGGGTCACCATTTTCCA
CATGTGACTTTGGTTGCCATTTTAGATATTGATGCGGGATTACTCAGTGTAGATATTCGAGCGCCAGAACGTACTGCTCA
ATTGATTGTACAAGTGGCTGGTCGTGCAGGTCGTGGAGAACATAAAGGTCATGTTTATTTACAGACTTTAAGGCCAGATC
ACCCTTTATTGACCACGCTTATTGAAAAAGATTATCGGGCAGTCGCAAAGCAAACATTGGCTGAACGTAAAGTTGCATTA
CTGCCGCCTTATCGCTATGCCGTACTAATACGCGCTGAATCGAAAGATCGCGATTATACCTTGCATTTTTTAAATGAAGC
TGCCGAGCAACTTCGTCAAATTGCAGGTGATATTGTTGATATCTGGGGGCCAATTCCCGCGCCAATGGAACGTAAAGCGG
GACGTTACCGCGCCCATATGGTGATTTTGTCTGCTGACCGCGCTCGTCTGCATTTTTACTTAAGACAATGGTGGGCTCAG
TTGGTCCATGCGCAAAGACAGCATCAACTCAGACTCTCTATTGATGTTGACCCGCAAGAATTTAGTTAG

Domains

Predicted by InterproScan.

Primosomal protein N C-terminal domain (PriA_C)

(643-738)

3DNA-binding domain (3BD) (PriA_3primeBD)

(15-114)

Type III restriction enzyme, res subunit (ResIII)

(208-369)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A2L1VKI5

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  priA Acinetobacter baumannii D1279779

96.765

100

0.968

Multiple sequence alignment