Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   BL1202_RS21750 Genome accession   NZ_CP017247
Coordinates   4192912..4193601 (+) Length   229 a.a.
NCBI ID   WP_069500928.1    Uniprot ID   -
Organism   Bacillus licheniformis strain BL1202     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 4187912..4198601
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BL1202_RS21730 (BL1202_04451) aspA 4188571..4189998 (-) 1428 WP_069500850.1 aspartate ammonia-lyase -
  BL1202_RS21735 (BL1202_04452) - 4190021..4191010 (-) 990 WP_069500851.1 asparaginase -
  BL1202_RS21740 (BL1202_04453) - 4191226..4191573 (+) 348 WP_020453443.1 helix-turn-helix domain-containing protein -
  BL1202_RS21745 (BL1202_04454) - 4191660..4192706 (-) 1047 WP_069500852.1 lactonase family protein -
  BL1202_RS21750 (BL1202_04455) braR 4192912..4193601 (+) 690 WP_069500928.1 response regulator transcription factor Regulator
  BL1202_RS21755 (BL1202_04456) - 4193598..4194578 (+) 981 WP_069500853.1 sensor histidine kinase -
  BL1202_RS21760 (BL1202_04457) - 4194667..4195347 (+) 681 WP_069500854.1 DUF418 domain-containing protein -
  BL1202_RS21765 (BL1202_04458) - 4195325..4196098 (+) 774 WP_069500855.1 ABC transporter ATP-binding protein -
  BL1202_RS21770 (BL1202_04459) - 4196073..4197950 (+) 1878 WP_069500856.1 FtsX-like permease family protein -
  BL1202_RS21775 (BL1202_04460) - 4197957..4198310 (+) 354 WP_069500857.1 YxeA family protein -

Sequence

Protein


Download         Length: 229 a.a.        Molecular weight: 26845.80 Da        Isoelectric Point: 5.0109

>NTDB_id=167285 BL1202_RS21750 WP_069500928.1 4192912..4193601(+) (braR) [Bacillus licheniformis strain BL1202]
MTKIMIVEDSEDIRKLLRDHLEKYGYETVAATDFTSILEMFLQEKPDLVLLDINLPSYDGYYWCRQIRQHSTCPIIFISA
RSGEMDQVMAIENGGDDYIEKPFSYEVVLAKIKGQIRRAFGEYAVKQGEKVIEFEGVQLFVERFELRCRDEKLELSKKES
KLLEVLLERGEKVTSRDRLMEKTWETDTFIDENTLNVYITRIRKKLRSLDAPFSIESVRGEGYQLRAKS

Nucleotide


Download         Length: 690 bp        

>NTDB_id=167285 BL1202_RS21750 WP_069500928.1 4192912..4193601(+) (braR) [Bacillus licheniformis strain BL1202]
ATGACGAAAATCATGATTGTCGAAGACAGCGAAGACATTCGAAAGCTTTTACGCGATCATTTAGAAAAATACGGATACGA
AACGGTTGCAGCGACTGATTTCACCTCTATCCTTGAAATGTTTCTTCAAGAGAAGCCCGATCTGGTATTGCTTGACATCA
ATCTGCCGTCATACGACGGGTACTACTGGTGCCGGCAAATCCGCCAGCATTCGACTTGTCCGATCATTTTCATTTCAGCG
AGAAGCGGAGAAATGGATCAGGTCATGGCGATCGAAAACGGCGGCGATGATTATATAGAAAAGCCTTTTTCATATGAGGT
GGTGCTCGCTAAAATTAAAGGCCAAATTCGCAGGGCATTTGGAGAATACGCCGTTAAACAAGGAGAAAAAGTGATTGAAT
TTGAAGGCGTCCAGCTGTTTGTCGAACGTTTTGAGCTGCGCTGCCGGGATGAGAAGCTCGAGCTTTCAAAAAAGGAAAGC
AAACTCTTGGAAGTGCTGCTTGAAAGAGGAGAAAAAGTGACAAGCAGAGACCGGTTAATGGAGAAGACATGGGAAACCGA
TACATTTATAGATGAAAACACGTTAAATGTCTATATTACAAGGATTCGCAAAAAATTGCGAAGCTTGGACGCGCCCTTCT
CAATTGAATCAGTGCGGGGCGAAGGGTATCAGCTGAGGGCGAAATCATGA

Domains

Predicted by InterProScan.

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(151-225)

Response regulator receiver domain (Response_reg)

(4-112)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

40.807

97.38

0.397

Multiple sequence alignment