Detailed information    

insolico Bioinformatically predicted

Overview

Name   comEC   Type   Machinery gene
Locus tag   BL1202_RS14460 Genome accession   NZ_CP017247
Coordinates   2776254..2778641 (-) Length   795 a.a.
NCBI ID   WP_069500614.1    Uniprot ID   -
Organism   Bacillus licheniformis strain BL1202     
Function   ssDNA transport into the cell (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 2771254..2783641
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BL1202_RS14430 (BL1202_02955) - 2771523..2771846 (-) 324 WP_003183676.1 YqxA family protein -
  BL1202_RS14435 (BL1202_02956) spoIIP 2771862..2773067 (-) 1206 WP_003183678.1 stage II sporulation protein P -
  BL1202_RS14440 (BL1202_02957) gpr 2773186..2774292 (-) 1107 WP_009327867.1 GPR endopeptidase -
  BL1202_RS14445 (BL1202_02958) rpsT 2774497..2774763 (+) 267 WP_003183682.1 30S ribosomal protein S20 -
  BL1202_RS14450 (BL1202_02959) holA 2774825..2775868 (-) 1044 WP_009327866.1 DNA polymerase III subunit delta -
  BL1202_RS14455 (BL1202_02960) - 2776098..2776229 (+) 132 WP_003183686.1 YqzM family protein -
  BL1202_RS14460 (BL1202_02961) comEC 2776254..2778641 (-) 2388 WP_069500614.1 DNA internalization-related competence protein ComEC/Rec2 Machinery gene
  BL1202_RS14465 (BL1202_02962) - 2778645..2779214 (-) 570 WP_003183690.1 ComE operon protein 2 -
  BL1202_RS14470 (BL1202_02963) comEA 2779283..2779912 (-) 630 WP_003183693.1 helix-hairpin-helix domain-containing protein Machinery gene
  BL1202_RS14475 (BL1202_02964) comER 2779996..2780817 (+) 822 WP_009327864.1 late competence protein ComER -
  BL1202_RS14480 (BL1202_02965) - 2780887..2781642 (-) 756 WP_011198132.1 class I SAM-dependent DNA methyltransferase -
  BL1202_RS14485 (BL1202_02966) rsfS 2781639..2781995 (-) 357 WP_003183699.1 ribosome silencing factor -
  BL1202_RS14490 (BL1202_02967) yqeK 2782009..2782572 (-) 564 WP_003183701.1 bis(5'-nucleosyl)-tetraphosphatase (symmetrical) YqeK -
  BL1202_RS14495 (BL1202_02968) - 2782562..2783131 (-) 570 WP_003183702.1 nicotinate-nucleotide adenylyltransferase -
  BL1202_RS14500 (BL1202_02969) yhbY 2783150..2783440 (-) 291 WP_003183704.1 ribosome assembly RNA-binding protein YhbY -

Sequence

Protein


Download         Length: 795 a.a.        Molecular weight: 87861.85 Da        Isoelectric Point: 8.2849

>NTDB_id=167244 BL1202_RS14460 WP_069500614.1 2776254..2778641(-) (comEC) [Bacillus licheniformis strain BL1202]
MDRHRIFPCGAISAAAGIASAHSSLYLFLAVGFFLFFILCFFKKQILLFALCAAVCILYFTSFYVIDHFNTTIYHEGKFH
TLASVQDIPVIDGDRLSFTAETDEGEALKAGYTLRSPQEKRALSALQPGSLCVMQCELKEPKKETVPGTFNQKESMYQKG
IHWIFAVQSITSCKPGGGLMPSLLKIRKAGLDFIEENMADSAAGIGRALIFGDRFLIEQDVLDGYQRLGIIHLLAISGLH
VGLLSAALFYIFIRFGVTRECAKWLLVIGLPVAAVLTGGAPSVMRAVFMSEIYLLASLSKKNFKSADVISIACLGLLLYH
PYLLFQAGFQLSFAVSFVFILSKEILTRPKSRISQLLLGSFLAQLASLPILLFHFQEFSFLSTLMNLFFIPLYIFIIMPL
SFGSLLAFICFHPLGEAAAAVLDRLLVWSHQAVKTVSAADVSVFSAAKPPDLLLFFYFTAIFLFLLLLEKEMSLRAVMIP
SGLLAAVFVIHACLPQLAGEGEVTMLDIGQGDSMYVSAPGQNGTVFIDTGGTVSFRKERWRKRKKDFSLGESVLMPFLAT
KGVKKLDALILTHADQDHIGEAHVLIQKHKVKQLIVPKGFAAEPSDEKLLRLALKEGVEVNVAKRGDILHIGNLEFYVLS
PKEADKNSKNNGSLVLWMKAGGFSWLLTGDLEKEGEKEMMEVYPNLKADILKVGHHGSKGSTGEELIKQIEPKTALISAG
EHNRYGHPHGEVLDILNRHDVKVFRTDRHGSIQHLFRGGNGTFLLHPPYDKVHSPQEKMTAEKQQSSKSRLPDGE

Nucleotide


Download         Length: 2388 bp        

>NTDB_id=167244 BL1202_RS14460 WP_069500614.1 2776254..2778641(-) (comEC) [Bacillus licheniformis strain BL1202]
ATGGACAGACATCGCATCTTCCCGTGCGGAGCGATTTCAGCGGCAGCCGGAATCGCCTCCGCTCACTCTTCTCTTTATCT
CTTCCTCGCCGTCGGTTTTTTTCTGTTCTTTATCCTCTGTTTCTTCAAAAAACAAATACTCCTTTTCGCTTTATGTGCAG
CGGTTTGTATTTTATATTTTACTTCTTTTTACGTGATCGACCATTTCAATACAACGATTTATCATGAAGGCAAATTTCAC
ACGCTCGCTTCTGTTCAGGATATTCCCGTAATAGACGGAGACCGGCTTTCTTTCACAGCCGAAACAGATGAGGGAGAAGC
TTTGAAAGCGGGATATACGCTCCGGTCTCCACAAGAAAAACGGGCGCTCTCAGCTCTTCAGCCGGGCAGCCTCTGTGTCA
TGCAATGTGAATTAAAAGAGCCGAAAAAAGAGACGGTTCCTGGCACTTTTAATCAAAAAGAATCCATGTATCAAAAAGGG
ATTCACTGGATTTTTGCAGTTCAGTCTATTACAAGCTGCAAGCCGGGCGGCGGCCTGATGCCATCTCTATTGAAAATCAG
AAAAGCGGGCCTTGATTTTATAGAGGAAAATATGGCGGACTCGGCTGCCGGTATTGGAAGAGCGCTAATTTTCGGAGACC
GGTTTCTCATTGAACAAGATGTCCTGGACGGCTATCAGCGTCTTGGAATCATTCACCTTTTAGCGATTTCCGGGCTTCAT
GTCGGTCTGCTCTCAGCCGCTCTGTTTTACATATTTATTCGCTTCGGCGTCACGAGGGAATGCGCAAAATGGCTGCTCGT
GATCGGCCTTCCCGTTGCCGCAGTTTTGACCGGAGGCGCCCCGTCGGTGATGAGAGCGGTTTTCATGTCTGAAATCTATC
TGCTGGCATCACTGTCTAAAAAGAACTTCAAAAGTGCCGATGTGATCAGCATTGCCTGCCTCGGACTGCTGCTGTATCAT
CCTTATCTGTTATTTCAAGCCGGATTCCAGCTTTCTTTTGCTGTATCCTTCGTTTTCATTCTTTCAAAGGAGATATTGAC
CAGGCCGAAAAGCCGAATCTCTCAGCTGCTATTGGGGTCATTTTTGGCTCAGCTCGCTTCCCTCCCGATTCTGCTTTTTC
ATTTTCAAGAGTTTTCATTTCTCAGCACATTAATGAATCTATTTTTTATACCTCTTTATATTTTCATCATCATGCCGCTG
TCTTTCGGAAGCCTGCTTGCTTTCATATGTTTTCATCCCTTGGGGGAGGCGGCAGCCGCCGTTCTTGACCGTCTGCTTGT
GTGGAGCCATCAGGCTGTTAAAACGGTGTCTGCCGCGGATGTTTCGGTCTTTTCTGCGGCTAAGCCGCCGGATCTTTTGT
TGTTTTTCTACTTCACAGCCATTTTTCTGTTTTTGCTGTTGCTGGAAAAAGAGATGTCGCTTCGTGCGGTCATGATTCCG
TCCGGCCTGCTTGCTGCTGTGTTTGTGATTCACGCATGTCTTCCTCAGCTTGCAGGTGAGGGAGAGGTTACAATGCTTGA
TATCGGCCAAGGGGACAGCATGTATGTCAGCGCTCCCGGTCAGAATGGCACGGTCTTCATTGATACGGGAGGAACCGTAT
CCTTCCGGAAAGAGCGGTGGAGAAAGCGGAAGAAGGATTTTTCATTGGGGGAGAGCGTGTTAATGCCTTTTCTGGCAACC
AAAGGGGTCAAGAAGCTCGATGCTTTAATTTTGACCCATGCTGATCAGGATCATATCGGTGAAGCGCATGTGCTGATCCA
AAAACATAAAGTGAAGCAATTGATCGTGCCGAAAGGCTTCGCAGCCGAACCGTCTGATGAAAAGCTGCTTCGCCTTGCCT
TGAAGGAAGGCGTCGAGGTGAATGTAGCCAAAAGAGGTGACATCCTTCATATTGGCAATCTTGAATTTTATGTTCTTTCA
CCGAAAGAGGCGGACAAAAACAGCAAAAACAATGGTTCCCTCGTATTGTGGATGAAAGCAGGCGGATTTTCGTGGCTGTT
AACTGGAGATTTGGAGAAGGAGGGCGAAAAGGAGATGATGGAAGTGTATCCGAATCTTAAAGCGGATATTCTGAAAGTCG
GTCACCATGGAAGCAAAGGTTCGACGGGTGAAGAGCTGATCAAGCAAATTGAGCCGAAAACCGCCCTCATTTCGGCGGGG
GAGCACAACCGCTACGGGCATCCCCACGGGGAAGTGCTGGACATCCTAAACCGCCACGATGTGAAGGTGTTCAGAACGGA
TCGGCACGGTTCGATTCAGCACCTATTTCGAGGCGGGAACGGAACGTTTTTGCTACATCCTCCATATGATAAAGTACATT
CCCCGCAAGAAAAAATGACTGCTGAAAAACAGCAGTCGTCAAAAAGCCGCTTGCCTGACGGAGAGTAA

Domains

Predicted by InterProScan.

Metallo-beta-lactamase superfamily (Lactamase_B)

(509-720)

Competence protein (Competence)

(209-470)

Domain of unknown function (DUF4131) (DUF4131)

(24-171)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comEC Bacillus subtilis subsp. subtilis str. 168

48.105

96.226

0.463