Detailed information NTG0167233

Bioinformatically predicted

Overview

• Name: rapC
• Type: Regulator
• Locus tag: BL1202_RS13135
• Genome accession: NZ_CP017247
• Coordinates: 2543813..2544943 (-)
• Length: 376 a.a.
• NCBI ID: WP_026699173.1
• Uniprot ID: -
• Organism: Bacillus licheniformis strain BL1202
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 2538813..2549943

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
BL1202_RS13115 (BL1202_02691)	-	2540002..2540346 (-)	345	WP_003183123.1	hypothetical protein	-
BL1202_RS13120 (BL1202_02692)	-	2540609..2542795 (-)	2187	WP_069500591.1	RNA ligase	-
BL1202_RS13125 (BL1202_02693)	-	2542922..2543359 (-)	438	WP_003183127.1	Hsp20/alpha crystallin family protein	-
BL1202_RS13130 (BL1202_02694)	-	2543518..2543823 (-)	306	WP_003183128.1	hypothetical protein	-
BL1202_RS13135 (BL1202_02695)	rapC	2543813..2544943 (-)	1131	WP_026699173.1	Rap family tetratricopeptide repeat protein	Regulator
BL1202_RS13140 (BL1202_02696)	-	2545174..2545611 (-)	438	WP_003183133.1	peptidylprolyl isomerase	-
BL1202_RS13145 (BL1202_02697)	-	2545741..2546844 (+)	1104	WP_003183136.1	DUF1002 domain-containing protein	-
BL1202_RS13150 (BL1202_02698)	-	2546827..2547702 (-)	876	WP_069500593.1	poly-gamma-glutamate hydrolase family protein	-
BL1202_RS13155 (BL1202_02699)	lysA	2547941..2549260 (-)	1320	WP_003183141.1	diaminopimelate decarboxylase	-

Sequence

Protein

• Length: 376 a.a.
• Molecular weight: 44216.02 Da
• Isoelectric Point: 4.6813

>NTDB_id=167233 BL1202_RS13135 WP_026699173.1 2543813..2544943(-) (rapC) [Bacillus licheniformis strain BL1202]
MSVKIPSTAVGVKINDWYNAIRKFNVTDAEMLKAEIEREISQMEEDQDLLLYYALMEFRHRIMLDYVKPLEEGETPPDFS
EILKDIEDEQGKLTGLLEYYFNFFRGMYEYKNHDYIKAISFYRRAEKKLLHVEDEIERAEFHFKMAEVFYHMKQSHVSMN
YALQAIETYQAHETYTVRRIQCEFVIAGNYDDLESNEKALSHLEKALKLSQQEGQLILEGHTYYNLGNCYYKMGDFDQAA
EYFNRAAAIYQEESSDILPKAFFSLALADFKLKQLEKADDALNKGIDIARRSDDAIYLSKFHFLKALYVDDDGRAPMLET
FQLLGSKKMYPDIEDLALEAAEYYNEIGRLSDSVYFYQTVFSARKQMKKGDWSYEI

Nucleotide

• Length: 1131 bp

>NTDB_id=167233 BL1202_RS13135 WP_026699173.1 2543813..2544943(-) (rapC) [Bacillus licheniformis strain BL1202]
GTGAGCGTAAAAATCCCATCGACGGCAGTCGGCGTAAAAATTAATGACTGGTATAACGCGATACGTAAATTCAACGTCAC
GGACGCCGAAATGCTGAAGGCAGAAATTGAGCGCGAAATTTCTCAAATGGAAGAGGATCAAGACTTATTATTGTATTACG
CCTTAATGGAATTCAGACACAGAATCATGCTTGATTACGTAAAACCTTTGGAAGAAGGCGAAACCCCGCCTGACTTTTCT
GAAATATTAAAAGATATCGAAGATGAACAAGGAAAGCTGACAGGCCTGCTCGAATATTATTTTAACTTTTTTAGAGGGAT
GTATGAATATAAAAACCATGATTATATTAAAGCGATCTCTTTTTACAGGCGCGCCGAAAAAAAGCTGCTGCACGTCGAGG
ACGAAATAGAGAGAGCCGAGTTTCATTTTAAAATGGCTGAAGTGTTTTATCATATGAAACAGAGCCATGTGTCGATGAAC
TATGCGCTTCAAGCGATTGAAACCTATCAGGCGCATGAAACCTACACGGTTCGGAGAATCCAATGCGAGTTCGTCATCGC
AGGGAACTATGACGATTTAGAGTCGAATGAAAAAGCGCTGTCACATCTTGAAAAGGCGCTGAAGCTTTCACAGCAAGAAG
GCCAGCTCATATTGGAAGGACACACCTATTACAATTTGGGAAACTGCTATTATAAGATGGGGGATTTCGATCAGGCAGCC
GAGTACTTCAACAGGGCTGCTGCGATTTATCAAGAAGAGTCATCAGATATTCTTCCAAAAGCGTTTTTCAGTCTTGCACT
TGCAGATTTCAAGTTGAAGCAGCTGGAAAAGGCGGATGACGCGTTAAACAAAGGAATTGACATCGCCCGCCGATCAGACG
ATGCGATCTACCTTTCAAAATTTCATTTTTTAAAAGCTTTGTATGTTGATGATGACGGCAGGGCTCCAATGCTGGAGACA
TTTCAGCTGCTCGGGTCAAAAAAGATGTATCCCGATATTGAGGACTTGGCATTGGAAGCAGCTGAATACTATAATGAAAT
TGGGCGCTTGAGCGACTCTGTTTATTTCTATCAAACGGTATTCAGTGCTCGAAAACAAATGAAAAAAGGGGACTGGTCGT
ATGAAATCTAA

Domains

Predicted by InterProScan.

• response regulator aspartate phosphatase H, N terminal (RapH_N) (4-65)

• Tetratricopeptide repeat (TPR_12) (190-252)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapC	Bacillus subtilis subsp. subtilis str. 168	47.48	100	0.476
rapF	Bacillus subtilis subsp. subtilis str. 168	44.619	100	0.452