Detailed information    

insolico Bioinformatically predicted

Overview

Name   treR   Type   Regulator
Locus tag   BL1202_RS04305 Genome accession   NZ_CP017247
Coordinates   860210..860926 (+) Length   238 a.a.
NCBI ID   WP_009329065.1    Uniprot ID   A0ABX3I5L7
Organism   Bacillus licheniformis strain BL1202     
Function   regulate expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 855210..865926
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BL1202_RS04285 (BL1202_00869) - 855678..856064 (+) 387 WP_003179739.1 DUF1992 domain-containing protein -
  BL1202_RS04290 (BL1202_00870) - 856126..856851 (+) 726 Protein_814 alanine/glycine:cation symporter family protein -
  BL1202_RS04295 (BL1202_00871) treP 857014..858426 (+) 1413 WP_069500302.1 PTS system trehalose-specific EIIBC component -
  BL1202_RS04300 (BL1202_00872) treC 858500..860188 (+) 1689 WP_069500303.1 alpha,alpha-phosphotrehalase -
  BL1202_RS04305 (BL1202_00873) treR 860210..860926 (+) 717 WP_009329065.1 trehalose operon repressor Regulator
  BL1202_RS04310 (BL1202_00874) - 861033..861725 (+) 693 WP_069500304.1 N-acetyltransferase -
  BL1202_RS04315 (BL1202_00875) - 861852..864212 (+) 2361 WP_231133631.1 NTTRR-F1 domain -
  BL1202_RS04320 (BL1202_00876) - 864390..865481 (-) 1092 WP_003179756.1 DegT/DnrJ/EryC1/StrS family aminotransferase -

Sequence

Protein


Download         Length: 238 a.a.        Molecular weight: 27767.56 Da        Isoelectric Point: 5.8721

>NTDB_id=167170 BL1202_RS04305 WP_009329065.1 860210..860926(+) (treR) [Bacillus licheniformis strain BL1202]
MKINKYMMIYKQIAEQIDQSILNAGDILPSENDLAEQHDTSRETVRKALNVLAQNGYIQKIKGKGSVVLHREKMQFPVSG
LVSFKELSETLGKETSTTVHEFGLTHPDAYIQKQLRTSGDEEVWRVVRSRNINGERIILDKDYFIRKHVPLLTKEICEDS
IYQYLEDECGLVISYAHKEIVVEPCTAEDQEYLDLNGYEHIVVVKNFVFLDDTTLFQYTESRHRLDKFRFVDFARREK

Nucleotide


Download         Length: 717 bp        

>NTDB_id=167170 BL1202_RS04305 WP_009329065.1 860210..860926(+) (treR) [Bacillus licheniformis strain BL1202]
ATGAAGATCAACAAGTATATGATGATTTACAAACAAATCGCGGAACAAATCGATCAAAGCATACTGAATGCCGGAGATAT
CCTGCCGTCTGAAAACGACCTTGCCGAACAGCACGACACCTCGAGGGAAACCGTTCGGAAAGCGCTGAACGTGCTTGCTC
AGAACGGATATATTCAGAAGATTAAAGGGAAGGGGTCAGTCGTGCTGCACAGGGAGAAAATGCAGTTCCCGGTTTCCGGT
TTGGTCAGCTTTAAGGAGCTTTCAGAAACGCTCGGAAAAGAGACAAGCACGACGGTCCATGAGTTCGGCTTGACGCATCC
GGACGCATATATTCAAAAGCAGCTCCGCACTTCCGGAGATGAAGAGGTATGGCGGGTTGTCAGGTCGCGGAACATCAACG
GAGAGCGTATCATCCTGGATAAAGACTATTTTATCCGCAAACACGTGCCGCTTTTAACGAAAGAAATATGCGAGGACTCG
ATCTATCAATACCTTGAAGATGAATGCGGGCTCGTCATCAGCTATGCTCATAAGGAAATTGTAGTCGAGCCATGTACGGC
AGAGGATCAAGAGTATTTGGATCTGAACGGATACGAGCACATTGTGGTTGTGAAAAATTTCGTTTTTCTTGATGATACGA
CCTTGTTTCAATATACGGAAAGCAGACACCGCCTTGATAAATTCCGGTTTGTCGATTTTGCAAGAAGAGAAAAGTAG

Domains

Predicted by InterProScan.

UTRA domain (UTRA)

(91-229)

Bacterial regulatory proteins, gntR family (GntR)

(6-68)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  treR Streptococcus mutans UA159

41.525

99.16

0.412

Multiple sequence alignment