Detailed information NTG0167007

Bioinformatically predicted

Overview

• Name: pilM
• Type: Machinery gene
• Locus tag: DPADHS01_RS30325
• Genome accession: NZ_CP013993
• Coordinates: 6423969..6425033 (-)
• Length: 354 a.a.
• NCBI ID: WP_003110888.1
• Uniprot ID: -
• Organism: Pseudomonas aeruginosa DHS01 strain DH01
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 6418969..6430033

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
DPADHS01_RS30300 (DPADHS01_30305)	aroK	6419504..6420022 (-)	519	WP_003095833.1	shikimate kinase AroK	-
DPADHS01_RS30305 (DPADHS01_30310)	pilQ	6420034..6422178 (-)	2145	WP_023465329.1	type 4a pilus secretin PilQ	Machinery gene
DPADHS01_RS30310 (DPADHS01_30315)	pilP	6422232..6422756 (-)	525	WP_003095836.1	type 4a pilus biogenesis lipoprotein PilP	-
DPADHS01_RS30315 (DPADHS01_30320)	pilO	6422753..6423376 (-)	624	WP_003103268.1	type 4a pilus biogenesis protein PilO	-
DPADHS01_RS30320 (DPADHS01_30325)	pilN	6423373..6423969 (-)	597	WP_003095839.1	type 4a pilus biogenesis protein PilN	-
DPADHS01_RS30325 (DPADHS01_30330)	pilM	6423969..6425033 (-)	1065	WP_003110888.1	type IV pilus assembly protein PilM	Machinery gene
DPADHS01_RS30330 (DPADHS01_30335)	-	6425218..6427689 (+)	2472	WP_003095841.1	penicillin-binding protein 1A	-
DPADHS01_RS30335 (DPADHS01_30340)	-	6427794..6429062 (-)	1269	WP_023465330.1	malic enzyme	-

Sequence

Protein

• Length: 354 a.a.
• Molecular weight: 37983.48 Da
• Isoelectric Point: 4.5405

>NTDB_id=167007 DPADHS01_RS30325 WP_003110888.1 6423969..6425033(-) (pilM) [Pseudomonas aeruginosa DHS01 strain DH01]
MLGLIKKKANTLLGIDISSTSVKLLELSRSGGRYKVEAYAVEPLPPNAVVEKNIVELEGVGQALSRVLVKAKTNLKSAVV
AVAGSAVITKTIEMEAGLSEDELENQLKIEADQYIPYPLEEVAIDFEVQGLSARNPERVDVLLAACRKENVEVREAALAL
AGLTAKVVDVEAYALERSYALLSSQLGADTDQLTVAVVDIGATMTTLSVLHNGRTIYTREQLFGGRQLTEEIQRRYGLSV
EEAGLAKKQGGLPDDYDSEVLRPFKDAVVQQVSRSLQFFFAAGQFNDVDYIVLAGGTASIQDLDRLIQQKIGTPTLVANP
FADMALNGKVNAGALASDAPALMIACGLALRSFD

Nucleotide

• Length: 1065 bp

>NTDB_id=167007 DPADHS01_RS30325 WP_003110888.1 6423969..6425033(-) (pilM) [Pseudomonas aeruginosa DHS01 strain DH01]
GTGCTAGGGCTCATAAAGAAGAAAGCGAACACCTTGCTGGGGATCGACATCAGCTCGACCTCGGTAAAGCTCCTTGAGTT
GAGCCGCTCCGGAGGCCGCTACAAAGTGGAGGCCTATGCCGTCGAGCCGCTTCCGCCGAATGCAGTCGTGGAAAAGAACA
TCGTCGAGCTGGAAGGGGTCGGCCAGGCGTTGTCACGGGTGCTGGTCAAGGCGAAAACCAACCTGAAGTCGGCCGTGGTC
GCCGTCGCCGGTTCGGCGGTGATCACCAAGACCATCGAGATGGAGGCCGGGCTTTCCGAGGATGAACTGGAAAACCAGCT
GAAGATCGAGGCCGACCAGTACATCCCCTATCCGCTGGAGGAAGTCGCCATCGACTTCGAGGTCCAGGGACTCTCCGCGC
GCAATCCCGAGCGCGTGGACGTACTCCTGGCCGCCTGTCGGAAAGAGAACGTCGAGGTTCGCGAAGCGGCCCTGGCGCTG
GCCGGCCTGACCGCCAAGGTGGTCGACGTCGAGGCCTACGCGCTGGAGCGCTCCTATGCGCTGCTGAGCAGCCAGCTGGG
TGCCGACACCGACCAGTTGACCGTGGCGGTAGTGGACATCGGCGCGACCATGACCACCCTGAGCGTCCTGCACAACGGAC
GCACCATCTATACCCGCGAACAGCTGTTCGGCGGTCGCCAGCTCACCGAGGAGATCCAGCGGCGTTACGGACTCTCGGTG
GAGGAAGCCGGTCTCGCCAAGAAGCAGGGCGGTCTTCCGGATGACTACGACAGCGAAGTTCTGCGTCCGTTCAAGGACGC
CGTGGTGCAGCAGGTTTCCCGCTCGCTGCAGTTCTTCTTCGCCGCCGGACAGTTCAACGACGTCGACTACATCGTCCTGG
CGGGCGGTACGGCGTCTATCCAGGATCTCGATCGGTTGATCCAGCAGAAGATCGGCACCCCGACCCTGGTCGCCAACCCG
TTCGCCGACATGGCGCTGAACGGCAAGGTGAATGCCGGCGCCCTGGCCAGCGACGCTCCGGCGTTGATGATCGCCTGCGG
CCTGGCGTTGAGGAGTTTCGACTGA

Domains

Predicted by InterproScan.

• Type IV pilus assembly protein PilM; (PilM_2) (14-353)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilM	Acinetobacter baumannii D1279779	55.899	100	0.562
comM	Acinetobacter nosocomialis M2	55.899	100	0.562
comM	Acinetobacter baylyi ADP1	51.977	100	0.52
pilM	Legionella pneumophila strain ERS1305867	46.61	100	0.466