Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   BFP66_RS04985 Genome accession   NZ_CP017142
Coordinates   991570..992235 (+) Length   221 a.a.
NCBI ID   WP_024395852.1    Uniprot ID   -
Organism   Streptococcus suis strain GZ0565     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 986570..997235
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BFP66_RS04955 (BFP66_04955) - 987668..987808 (+) 141 WP_032536643.1 hypothetical protein -
  BFP66_RS04960 (BFP66_04960) - 987821..988210 (+) 390 WP_024395849.1 NisI/SpaI family lantibiotic immunity lipoprotein -
  BFP66_RS04965 (BFP66_04965) - 988219..988971 (+) 753 WP_015646831.1 ABC transporter ATP-binding protein -
  BFP66_RS04970 (BFP66_04970) - 988972..990942 (+) 1971 WP_024395850.1 ABC transporter permease -
  BFP66_RS04975 (BFP66_04975) relB 991033..991272 (+) 240 WP_015646833.1 type II toxin-antitoxin system RelB family antitoxin -
  BFP66_RS04980 (BFP66_04980) - 991262..991528 (+) 267 WP_024395851.1 type II toxin-antitoxin system RelE family toxin -
  BFP66_RS04985 (BFP66_04985) braR 991570..992235 (+) 666 WP_024395852.1 response regulator transcription factor Regulator
  BFP66_RS04990 (BFP66_04990) - 992232..993173 (+) 942 Protein_940 sensor histidine kinase -
  BFP66_RS04995 (BFP66_04995) - 993250..994758 (+) 1509 WP_024395853.1 phosphoglucomutase -
  BFP66_RS05000 (BFP66_05000) xerS 994821..995891 (-) 1071 WP_024390379.1 tyrosine recombinase XerS Machinery gene
  BFP66_RS11160 - 996058..996234 (-) 177 WP_228381310.1 hypothetical protein -
  BFP66_RS05005 (BFP66_05005) - 996240..996584 (-) 345 WP_228381311.1 adenylyl-sulfate kinase -

Sequence

Protein


Download         Length: 221 a.a.        Molecular weight: 25432.21 Da        Isoelectric Point: 4.8839

>NTDB_id=166803 BFP66_RS04985 WP_024395852.1 991570..992235(+) (braR) [Streptococcus suis strain GZ0565]
MKKEKIYIVEDDEMIVQLLKQHLGKSYQVESVQNFRAVSQEVAEIKPDLVLMDISLPYYNGFYWTTEIRKTMTMPIIFIS
SSDDEMNAVMAMNMGGDDFVSKPFSLGILDAKIGAFLRRVNQFSKSSELSINQFQLSLDGRFSNESEQVQLSPTETKILS
ALLERQGQIVSKEELLEKLWENEEFIDQNTLNVNMTRLRKKVSEVGFERIHTVRGVGYLVK

Nucleotide


Download         Length: 666 bp        

>NTDB_id=166803 BFP66_RS04985 WP_024395852.1 991570..992235(+) (braR) [Streptococcus suis strain GZ0565]
ATGAAAAAAGAAAAGATTTATATTGTTGAAGATGATGAGATGATTGTCCAGCTCTTGAAGCAGCATTTGGGAAAATCTTA
TCAGGTGGAAAGTGTGCAGAATTTCCGAGCTGTCAGTCAGGAAGTTGCTGAAATCAAACCAGACTTGGTGCTGATGGACA
TTAGCCTGCCTTATTACAACGGTTTTTACTGGACGACAGAAATCCGTAAAACCATGACCATGCCCATTATCTTTATTTCT
TCTAGCGATGATGAGATGAATGCGGTCATGGCCATGAACATGGGTGGCGATGATTTTGTGTCCAAGCCCTTTTCTCTGGG
AATTTTGGATGCCAAAATCGGTGCCTTTCTGCGTCGGGTCAATCAATTCAGCAAATCGAGCGAATTGTCTATCAATCAGT
TCCAGCTTAGTTTGGACGGGCGATTTTCAAACGAATCGGAACAGGTTCAGCTTTCACCTACTGAAACCAAGATTTTATCC
GCCTTACTAGAACGACAAGGGCAGATTGTTAGCAAGGAAGAACTCCTGGAAAAACTCTGGGAAAATGAAGAATTTATCGA
TCAGAATACGCTCAATGTCAACATGACCAGACTGCGTAAGAAGGTGAGCGAAGTCGGGTTTGAACGAATTCATACGGTTC
GTGGCGTGGGGTACTTGGTCAAATGA

Domains

Predicted by InterProScan.

Response regulator receiver domain (Response_reg)

(6-111)

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(147-219)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

46.818

99.548

0.466