Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrQ   Type   Regulator
Locus tag   BFP66_RS01435 Genome accession   NZ_CP017142
Coordinates   267591..267776 (-) Length   61 a.a.
NCBI ID   WP_069358620.1    Uniprot ID   -
Organism   Streptococcus suis strain GZ0565     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 262591..272776
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BFP66_RS01415 (BFP66_01415) mvk 263354..264289 (+) 936 WP_024395515.1 mevalonate kinase -
  BFP66_RS01420 (BFP66_01420) mvaD 264282..265307 (+) 1026 WP_024395516.1 diphosphomevalonate decarboxylase -
  BFP66_RS01425 (BFP66_01425) - 265309..266388 (+) 1080 WP_024394742.1 phosphomevalonate kinase -
  BFP66_RS01430 (BFP66_01430) fni 266399..267496 (+) 1098 WP_024395517.1 type 2 isopentenyl-diphosphate Delta-isomerase -
  BFP66_RS01435 (BFP66_01435) rcrQ 267591..267776 (-) 186 WP_069358620.1 hypothetical protein Regulator
  BFP66_RS01440 (BFP66_01440) - 267862..268545 (-) 684 Protein_251 ABC transporter transmembrane domain-containing protein -
  BFP66_RS01445 (BFP66_01445) - 268802..269068 (+) 267 WP_014735405.1 ACT domain-containing protein -
  BFP66_RS01450 (BFP66_01450) - 269080..270417 (+) 1338 WP_024395520.1 PFL family protein -
  BFP66_RS01455 (BFP66_01455) - 270492..271187 (+) 696 WP_024395521.1 histidine phosphatase family protein -
  BFP66_RS01460 (BFP66_01460) hrcA 271409..272443 (+) 1035 WP_024395522.1 heat-inducible transcriptional repressor HrcA -

Sequence

Protein


Download         Length: 61 a.a.        Molecular weight: 6864.92 Da        Isoelectric Point: 9.6596

>NTDB_id=166771 BFP66_RS01435 WP_069358620.1 267591..267776(-) (rcrQ) [Streptococcus suis strain GZ0565]
MRKGRTTIAIAHRLSTIQDADCIYVLDKGKIIESGNHEQLLSLKGHYHRMYQLQAGQLAAT

Nucleotide


Download         Length: 186 bp        

>NTDB_id=166771 BFP66_RS01435 WP_069358620.1 267591..267776(-) (rcrQ) [Streptococcus suis strain GZ0565]
ATGCGAAAAGGGCGGACAACTATTGCTATCGCCCACCGCCTATCGACCATTCAAGATGCTGACTGTATCTATGTCTTGGA
CAAGGGGAAAATTATCGAGTCTGGAAACCACGAGCAGCTCCTATCCCTCAAGGGTCACTACCACCGTATGTACCAGTTAC
AAGCAGGGCAGTTGGCAGCGACCTAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrQ Streptococcus mutans UA159

50

88.525

0.443
  comA Streptococcus mitis NCTC 12261

44

81.967

0.361