Detailed information    

insolico Bioinformatically predicted

Overview


Name   amiE   Type   Regulator
Locus tag   FORC45_RS04785 Genome accession   NZ_CP017115
Coordinates   949251..950237 (+) Length   328 a.a.
NCBI ID   WP_001067042.1    Uniprot ID   -
Organism   Staphylococcus aureus strain FORC_045     
Function   internalize XIP (predicted from homology)   
Competence regulation

Genomic Context


Location: 944251..955237
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FORC45_RS04770 (FORC45_0876) - 944658..945599 (+) 942 WP_000786736.1 ABC transporter ATP-binding protein -
  FORC45_RS04775 (FORC45_0877) - 945618..947273 (+) 1656 WP_000197023.1 peptide ABC transporter substrate-binding protein -
  FORC45_RS04780 (FORC45_0878) opp4A 947485..949200 (+) 1716 WP_000517176.1 oligopeptide ABC transporter substrate-binding protein -
  FORC45_RS04785 (FORC45_0879) amiE 949251..950237 (+) 987 WP_001067042.1 ABC transporter ATP-binding protein Regulator
  FORC45_RS04790 (FORC45_0880) - 950240..951220 (+) 981 WP_000427769.1 ABC transporter ATP-binding protein -
  FORC45_RS04795 (FORC45_0881) opp4B 951213..952175 (+) 963 WP_000239820.1 oligopeptide ABC transporter permease -
  FORC45_RS04800 (FORC45_0882) opp4C 952187..953068 (+) 882 WP_001180274.1 oligopeptide ABC transporter permease -
  FORC45_RS04805 (FORC45_0883) trpS 953110..954099 (-) 990 WP_000448934.1 tryptophan--tRNA ligase -
  FORC45_RS04810 (FORC45_0884) spxA 954394..954789 (+) 396 WP_000258003.1 transcriptional regulator SpxA -

Sequence


Protein


Download         Length: 328 a.a.        Molecular weight: 37007.44 Da        Isoelectric Point: 8.1005

>NTDB_id=166683 FORC45_RS04785 WP_001067042.1 949251..950237(+) (amiE) [Staphylococcus aureus strain FORC_045]
MNNVLLEVKDLETSLKINNEWLATVENISFELSKGEVLGIVGESGCGKSILSKSIIKLLPEKISKLSNGEVIFDGKRIDT
LNEKQLLDIRGNDIAMIFQEPMTALNPVFTIKNQLVESIKSHKKISKKEANNLAKDLLKKVGIARQDEILNSYPHQLSGG
MRQRVMIAMAISCSPKLLIADEPTTALDVTIQAQILDLLKELQKETQMAIMMITHDLSVVAEFCDKVLVMYAGQIVEFGG
IKEILHNPKHPYTQKLLSTIPKLKEEQKRLETIEGIVPSIQAFHVNKCRFANRCNKKMDICNNQSPKMHVCEDVIVRCHL
YKNEYKEI

Nucleotide


Download         Length: 987 bp        

>NTDB_id=166683 FORC45_RS04785 WP_001067042.1 949251..950237(+) (amiE) [Staphylococcus aureus strain FORC_045]
ATGAATAATGTATTGTTAGAGGTTAAAGATTTAGAAACATCATTAAAAATAAATAATGAATGGTTAGCAACTGTTGAAAA
TATTTCTTTTGAATTATCTAAAGGAGAAGTTTTGGGTATAGTAGGGGAATCTGGTTGCGGTAAGTCCATATTAAGTAAGT
CAATTATTAAATTATTACCAGAAAAGATATCTAAACTAAGTAATGGAGAAGTTATATTTGATGGTAAACGAATCGATACG
CTCAATGAGAAGCAATTGCTAGATATTCGAGGAAATGATATTGCTATGATTTTTCAAGAACCTATGACTGCTTTAAATCC
TGTATTTACCATAAAAAATCAACTTGTGGAATCTATAAAATCACATAAAAAAATTTCTAAAAAAGAAGCAAATAACTTAG
CAAAAGATTTACTAAAAAAAGTTGGAATTGCTAGACAAGATGAAATATTAAATAGCTATCCTCATCAATTATCTGGTGGT
ATGAGACAAAGAGTAATGATTGCAATGGCCATTTCATGTTCTCCTAAATTATTAATTGCTGATGAACCTACAACAGCATT
GGATGTCACGATTCAAGCGCAAATATTAGACTTATTAAAAGAATTGCAAAAGGAAACGCAAATGGCAATTATGATGATTA
CACATGATTTGAGTGTAGTTGCTGAGTTTTGCGATAAAGTCTTAGTTATGTATGCAGGTCAAATTGTAGAATTTGGAGGC
ATAAAAGAAATACTACACAATCCGAAACATCCTTATACCCAAAAATTATTATCAACAATTCCAAAACTTAAAGAAGAGCA
GAAACGACTTGAAACGATAGAAGGAATTGTGCCATCAATCCAAGCATTTCACGTTAATAAGTGCAGATTTGCAAATAGAT
GTAACAAAAAAATGGATATTTGTAATAATCAATCTCCTAAAATGCATGTTTGTGAAGACGTCATTGTACGTTGTCATTTG
TACAAAAATGAATATAAGGAGATATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  amiE Streptococcus salivarius strain HSISS4

44.551

95.122

0.424

  oppD Streptococcus mutans UA159

44.66

94.207

0.421

  amiE Streptococcus thermophilus LMG 18311

43.91

95.122

0.418

  amiE Streptococcus thermophilus LMD-9

43.91

95.122

0.418


Multiple sequence alignment