Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   BS16045_RS16065 Genome accession   NZ_CP017112
Coordinates   3059955..3060650 (-) Length   231 a.a.
NCBI ID   WP_069323070.1    Uniprot ID   -
Organism   Bacillus subtilis strain BS16045     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 3054955..3065650
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BS16045_RS16045 (BS16045_03173) yttA 3055382..3056128 (+) 747 WP_014477720.1 LMBR1 domain-containing protein -
  BS16045_RS16050 (BS16045_03174) bceB 3056165..3058105 (-) 1941 WP_003229139.1 bacitracin ABC transporter permease BceB -
  BS16045_RS16055 (BS16045_03175) bceA 3058095..3058856 (-) 762 WP_003229137.1 bacitracin ABC transporter ATP-binding protein BceA -
  BS16045_RS16060 (BS16045_03176) bceS 3058958..3059962 (-) 1005 WP_069322836.1 two-component sensor histidine kinase BceS -
  BS16045_RS16065 (BS16045_03177) braR 3059955..3060650 (-) 696 WP_069323070.1 two-component response regulator BceR Regulator
  BS16045_RS16070 (BS16045_03178) ytrF 3060747..3062057 (-) 1311 WP_004398682.1 ABC transporter permease YtrF -
  BS16045_RS16075 (BS16045_03179) ytrE 3062047..3062742 (-) 696 WP_014477726.1 ABC transporter ATP-binding protein YtrE -
  BS16045_RS16080 (BS16045_03180) ytrD 3062757..3063734 (-) 978 WP_032722368.1 ABC transporter permease YtrD -
  BS16045_RS16085 (BS16045_03181) ytrC 3063764..3064750 (-) 987 WP_015714563.1 ABC transporter permease YtrC -
  BS16045_RS16090 (BS16045_03182) ytrB 3064744..3065622 (-) 879 WP_003229123.1 ABC transporter ATP-binding protein YtrB -

Sequence

Protein


Download         Length: 231 a.a.        Molecular weight: 26935.85 Da        Isoelectric Point: 5.3775

>NTDB_id=166629 BS16045_RS16065 WP_069323070.1 3059955..3060650(-) (braR) [Bacillus subtilis strain BS16045]
MFKLLLIEDDESLFHEIKDRLTGWSYDVYGIQDFSQVLQEFAAVNPDCVIIDVQLPKFDGFHWCRLIRSRSNVPILFLSS
RDHPADMVMSMQLGADDFIQKPFHFDVLIAKIQAMFRRVHHYNTEPNTIKTWCGAAVDAEQNLVSNDKGSVELTKNEMFI
LKQLIEQKNKIVSREELIRSLWNDERFVSDNTLTVNVNRLRKKLEVLQLGAYIETKVGQGYIAKEEDKFYD

Nucleotide


Download         Length: 696 bp        

>NTDB_id=166629 BS16045_RS16065 WP_069323070.1 3059955..3060650(-) (braR) [Bacillus subtilis strain BS16045]
TTGTTTAAACTTTTGCTGATTGAAGATGATGAATCGCTGTTTCATGAAATCAAGGATCGTTTAACGGGATGGTCCTATGA
TGTATACGGCATTCAGGATTTCAGTCAGGTGCTGCAGGAATTTGCGGCGGTTAATCCTGATTGTGTCATTATTGATGTGC
AGCTGCCTAAATTTGACGGCTTTCATTGGTGCCGTCTGATCCGCTCCCGGTCAAATGTTCCGATTCTCTTTTTATCCTCC
CGGGATCATCCTGCTGATATGGTGATGTCCATGCAGCTCGGGGCAGATGACTTTATTCAAAAGCCATTTCATTTTGATGT
GCTGATCGCGAAAATCCAAGCGATGTTCCGGCGTGTGCACCATTATAATACGGAGCCGAATACGATTAAAACGTGGTGCG
GCGCTGCTGTAGACGCGGAGCAGAACCTCGTCAGCAATGACAAAGGATCTGTTGAACTGACCAAAAATGAAATGTTCATT
CTAAAACAATTAATAGAGCAAAAAAACAAGATCGTCAGCCGGGAAGAGCTGATCAGAAGCTTGTGGAACGATGAGCGTTT
TGTTAGTGATAATACGCTGACCGTCAATGTCAATCGCCTTCGAAAAAAACTGGAGGTCCTGCAGCTAGGTGCATATATCG
AGACAAAGGTGGGCCAGGGCTACATCGCGAAGGAAGAGGACAAGTTCTATGATTAA

Domains

Predicted by InterProScan.

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(150-222)

Response regulator receiver domain (Response_reg)

(5-113)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

39.545

95.238

0.377

Multiple sequence alignment