Detailed information    

insolico Bioinformatically predicted

Overview


Name   vraS   Type   Regulator
Locus tag   ASL16_RS10880 Genome accession   NZ_CP013953
Coordinates   2133776..2134819 (-) Length   347 a.a.
NCBI ID   WP_001017131.1    Uniprot ID   A0A0D1IMN4
Organism   Staphylococcus aureus strain NCCP14558 isolate sequencing     
Function   repress expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context


Location: 2128776..2139819
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ASL16_RS10850 (ASL16_10855) - 2129197..2130453 (-) 1257 WP_001795108.1 aminopeptidase -
  ASL16_RS10855 (ASL16_10860) - 2130456..2130656 (-) 201 WP_000180460.1 DUF1128 family protein -
  ASL16_RS10860 (ASL16_10865) - 2130803..2131267 (+) 465 WP_042109418.1 low molecular weight protein-tyrosine-phosphatase -
  ASL16_RS10865 (ASL16_10870) - 2131274..2131549 (+) 276 WP_000428172.1 YtxH domain-containing protein -
  ASL16_RS10870 (ASL16_10875) - 2131827..2133044 (+) 1218 WP_000037075.1 YihY/virulence factor BrkB family protein -
  ASL16_RS10875 (ASL16_10880) vraR 2133157..2133786 (-) 630 WP_042109421.1 two-component system response regulator VraR Regulator
  ASL16_RS10880 (ASL16_10885) vraS 2133776..2134819 (-) 1044 WP_001017131.1 sensor histidine kinase Regulator
  ASL16_RS10885 (ASL16_10890) liaF 2134816..2135517 (-) 702 WP_063663545.1 cell wall-active antibiotics response protein LiaF -
  ASL16_RS10890 (ASL16_10895) - 2135532..2135918 (-) 387 WP_001110179.1 hypothetical protein -
  ASL16_RS10895 (ASL16_10900) map 2136135..2136893 (-) 759 WP_000636142.1 type I methionyl aminopeptidase -
  ASL16_RS16110 - 2137424..2137552 (+) 129 WP_256969316.1 aromatic acid exporter family protein -
  ASL16_RS10905 (ASL16_10910) - 2137642..2138961 (+) 1320 WP_001557163.1 ISL3-like element IS1181 family transposase -

Sequence


Protein


Download         Length: 347 a.a.        Molecular weight: 40044.52 Da        Isoelectric Point: 6.0577

>NTDB_id=166586 ASL16_RS10880 WP_001017131.1 2133776..2134819(-) (vraS) [Staphylococcus aureus strain NCCP14558 isolate sequencing]
MNHYIRTIGSMLILVYSMLAAFLFIDKVFVNIIYFQGMFYTQIFGIPVFLFLNLIIILLCIIVGSVLAYKINQQNDWIKT
QIERSMEGETVGINDQNIEIYSETLDLYHTLVPLNQELHKLRLKTQNLTNENYNINDVKVKKIIEDERQRLARELHDSVS
QQLFAASMMLSAIKETKLEPPLDQQIPILEKMVQDSQLEMRALLLHLRPLGLKDKSLGEGIKDLVIDLQKKVPMKVVHEI
QDFKVPKGIEDHLFRITQEAISNTLRHSNGTKVTVELFNKDDYLLLRIQDNGKGFNVDEKLEQSYGLKNMRERALEIGAT
FHIVSLPDSGTRIEVKAPLNKEDSYDD

Nucleotide


Download         Length: 1044 bp        

>NTDB_id=166586 ASL16_RS10880 WP_001017131.1 2133776..2134819(-) (vraS) [Staphylococcus aureus strain NCCP14558 isolate sequencing]
ATGAACCACTACATTAGAACAATTGGTTCAATGCTCATCTTAGTATATAGCATGCTAGCTGCATTTCTATTCATCGATAA
AGTTTTTGTAAATATCATCTATTTTCAAGGTATGTTTTATACACAAATATTCGGAATACCAGTCTTTTTATTTTTAAATC
TCATCATCATATTATTGTGTATTATTGTTGGTTCGGTACTCGCATACAAAATCAATCAGCAAAATGATTGGATTAAGACG
CAAATTGAGCGTTCAATGGAAGGCGAAACAGTTGGCATTAATGATCAAAATATAGAAATATATAGTGAAACGTTAGATTT
ATACCATACACTCGTACCTTTAAATCAAGAATTGCATAAGTTGCGACTTAAAACTCAAAACTTAACCAATGAAAATTATA
ATATTAATGATGTGAAAGTTAAAAAGATTATTGAAGATGAACGTCAAAGACTAGCTCGAGAACTTCACGATTCTGTTAGT
CAGCAACTTTTTGCGGCAAGTATGATGCTTTCTGCTATCAAAGAAACGAAGTTAGAACCACCATTAGACCAACAAATTCC
GATTTTAGAGAAAATGGTTCAAGATTCGCAGTTAGAAATGCGTGCTTTGCTGTTACATTTAAGACCGCTTGGTTTAAAAG
ACAAATCTTTAGGTGAGGGTATTAAAGATTTAGTTATTGATTTACAAAAAAAAGTGCCAATGAAAGTTGTGCATGAAATA
CAAGATTTTAAAGTGCCTAAAGGTATTGAAGATCATTTGTTCAGAATTACACAGGAAGCAATTTCGAATACATTGCGTCA
TTCAAACGGTACAAAAGTGACAGTAGAATTGTTTAATAAAGACGATTATTTATTGTTGAGAATTCAAGATAATGGTAAAG
GTTTTAATGTTGATGAAAAATTAGAACAAAGTTATGGACTTAAAAATATGCGTGAAAGAGCTTTGGAAATTGGTGCAACG
TTCCATATTGTATCATTGCCAGATTCAGGTACACGTATCGAGGTGAAAGCACCTTTAAATAAGGAGGATTCGTATGACGA
TTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A0D1IMN4

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vraS Staphylococcus aureus N315

100

100

1


Multiple sequence alignment