Detailed information
Bioinformatically predicted
Overview
| Name | comGC | Type | Machinery gene |
| Locus tag | AUL54_RS18310 | Genome accession | NZ_CP013950 |
| Coordinates | 3726963..3727229 (+) | Length | 88 a.a. |
| NCBI ID | WP_045926801.1 | Uniprot ID | - |
| Organism | Bacillus sp. SDLI1 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 3721963..3732229
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AUL54_RS18290 (AUL54_18300) | - | 3722232..3723533 (-) | 1302 | WP_060964762.1 | hemolysin family protein | - |
| AUL54_RS18295 (AUL54_18305) | - | 3723679..3724629 (+) | 951 | WP_060964763.1 | magnesium transporter CorA family protein | - |
| AUL54_RS18300 (AUL54_18310) | comGA | 3724822..3725892 (+) | 1071 | WP_045926720.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| AUL54_RS18305 (AUL54_18315) | comGB | 3725879..3726916 (+) | 1038 | WP_060964764.1 | competence type IV pilus assembly protein ComGB | Machinery gene |
| AUL54_RS18310 (AUL54_18320) | comGC | 3726963..3727229 (+) | 267 | WP_045926801.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| AUL54_RS18315 (AUL54_18325) | comGD | 3727219..3727656 (+) | 438 | WP_060964765.1 | competence type IV pilus minor pilin ComGD | Machinery gene |
| AUL54_RS18320 (AUL54_18330) | comGE | 3727640..3727954 (+) | 315 | WP_060964766.1 | competence type IV pilus minor pilin ComGE | Machinery gene |
| AUL54_RS18325 (AUL54_18335) | comGF | 3727866..3728363 (+) | 498 | WP_235588382.1 | competence type IV pilus minor pilin ComGF | - |
| AUL54_RS18330 (AUL54_18340) | comGG | 3728364..3728741 (+) | 378 | WP_060964768.1 | competence type IV pilus minor pilin ComGG | Machinery gene |
| AUL54_RS18335 (AUL54_18345) | - | 3728798..3728977 (+) | 180 | WP_022552966.1 | YqzE family protein | - |
| AUL54_RS18340 (AUL54_18350) | - | 3729018..3729347 (-) | 330 | WP_016938972.1 | DUF3889 domain-containing protein | - |
| AUL54_RS18345 (AUL54_18355) | tapA | 3729606..3730277 (+) | 672 | WP_060964769.1 | amyloid fiber anchoring/assembly protein TapA | - |
| AUL54_RS18350 (AUL54_18360) | - | 3730249..3730833 (+) | 585 | WP_060964770.1 | signal peptidase I | - |
| AUL54_RS18355 (AUL54_18365) | - | 3730897..3731682 (+) | 786 | WP_016938976.1 | TasA family protein | - |
| AUL54_RS18360 (AUL54_18370) | sinR | 3731730..3732065 (-) | 336 | WP_003226345.1 | transcriptional regulator SinR | Regulator |
Sequence
Protein
Download Length: 88 a.a. Molecular weight: 9735.39 Da Isoelectric Point: 6.7057
>NTDB_id=166505 AUL54_RS18310 WP_045926801.1 3726963..3727229(+) (comGC) [Bacillus sp. SDLI1]
MLIVLFIVSILLLITIPNVTKHNQSIQHKGCEGLQNMVKAQVTAYEIDHEGKMPDMKDLQSEGYIKKNTACPNGKQILIS
GGEVTVEQ
MLIVLFIVSILLLITIPNVTKHNQSIQHKGCEGLQNMVKAQVTAYEIDHEGKMPDMKDLQSEGYIKKNTACPNGKQILIS
GGEVTVEQ
Nucleotide
Download Length: 267 bp
>NTDB_id=166505 AUL54_RS18310 WP_045926801.1 3726963..3727229(+) (comGC) [Bacillus sp. SDLI1]
ATGCTGATCGTGTTATTTATCGTTTCAATTCTGCTTTTAATAACGATTCCTAACGTTACAAAACATAATCAAAGCATACA
GCATAAAGGCTGTGAAGGACTGCAGAATATGGTGAAAGCCCAAGTGACGGCGTACGAAATCGACCATGAAGGAAAAATGC
CGGATATGAAAGACTTACAATCAGAGGGATATATCAAAAAGAATACAGCCTGTCCGAATGGAAAACAGATCTTAATTAGC
GGCGGGGAAGTTACAGTTGAACAATAA
ATGCTGATCGTGTTATTTATCGTTTCAATTCTGCTTTTAATAACGATTCCTAACGTTACAAAACATAATCAAAGCATACA
GCATAAAGGCTGTGAAGGACTGCAGAATATGGTGAAAGCCCAAGTGACGGCGTACGAAATCGACCATGAAGGAAAAATGC
CGGATATGAAAGACTTACAATCAGAGGGATATATCAAAAAGAATACAGCCTGTCCGAATGGAAAACAGATCTTAATTAGC
GGCGGGGAAGTTACAGTTGAACAATAA
Domains
No domain identified.
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGC | Bacillus subtilis subsp. subtilis str. 168 |
74.648 |
80.682 |
0.602 |