Detailed information NTG0166480

Bioinformatically predicted

Overview

• Name: rapF
• Type: Regulator
• Locus tag: AUL54_RS12385
• Genome accession: NZ_CP013950
• Coordinates: 2574869..2576014 (-)
• Length: 381 a.a.
• NCBI ID: WP_082761635.1
• Uniprot ID: A0AAI8HKG6
• Organism: Bacillus sp. SDLI1
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 2569869..2581014

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AUL54_RS12365 (AUL54_12375)	-	2570154..2570585 (+)	432	WP_060964021.1	hypothetical protein	-
AUL54_RS12370 (AUL54_12380)	-	2570610..2572682 (-)	2073	WP_060964022.1	transglycosylase domain-containing protein	-
AUL54_RS12375 (AUL54_12385)	speE	2572882..2573712 (+)	831	WP_060964023.1	spermidine synthase	-
AUL54_RS12380 (AUL54_12390)	speB	2573771..2574643 (+)	873	WP_060964024.1	agmatinase	-
AUL54_RS21205	-	2574766..2574885 (-)	120	WP_017418707.1	PhrC/PhrF family phosphatase-inhibitory pheromone	-
AUL54_RS12385 (AUL54_12395)	rapF	2574869..2576014 (-)	1146	WP_082761635.1	Rap family tetratricopeptide repeat protein	Regulator
AUL54_RS12390 (AUL54_12400)	-	2576306..2576734 (+)	429	WP_003151069.1	DUF1934 family protein	-
AUL54_RS12395 (AUL54_12405)	argS	2576731..2578401 (+)	1671	WP_060964025.1	arginine--tRNA ligase	-
AUL54_RS12400 (AUL54_12410)	narK	2578536..2579723 (+)	1188	WP_060964026.1	nitrate transporter NarK	-
AUL54_RS12405 (AUL54_12415)	fnr	2579824..2580540 (+)	717	WP_060964027.1	fumarate/nitrate reduction transcriptional regulator Fnr	-

Sequence

Protein

• Length: 381 a.a.
• Molecular weight: 45784.27 Da
• Isoelectric Point: 5.0694

>NTDB_id=166480 AUL54_RS12385 WP_082761635.1 2574869..2576014(-) (rapF) [Bacillus sp. SDLI1]
MASVVSSSAVGEKINEWYMYIRRFSIPDAEYLRREIKEELASLEDDQDLHLYYSLMEFRHNLMLEYLEPLESQRIEEQPR
LSDLLADIDKKQARLTGRLDYYFNFFRGMYELECREYLSAIQFFKKAESKLTYVKDHIEKAEFYFKMSEVYYYMKQTYVS
MDYARQAYLIYKDEKKYNIRLTQCHSLFGANYLDVKQYDHAISHFQKAYTMAELEQQPQLMGRTLFNIALCHNNQNNKVE
AIPHLKEAIAVFEKAQMSHSLPQPYFLLTQIYFKLENIDNAYDYHKKGISICKEIDDIIYEEKFKFLEYLYMPDPRDTLI
NDCLHFLESKLMYADIEELALDVAKYYYTKEEYKKASVYFLKVEEARQQIEGGVNLYEIEV

Nucleotide

• Length: 1146 bp

>NTDB_id=166480 AUL54_RS12385 WP_082761635.1 2574869..2576014(-) (rapF) [Bacillus sp. SDLI1]
GTGGCGAGTGTTGTATCGTCTTCAGCGGTTGGAGAAAAAATCAACGAATGGTATATGTACATTCGAAGGTTCAGCATCCC
GGACGCCGAGTACTTGCGGAGAGAAATTAAAGAAGAGCTTGCAAGCCTGGAAGATGACCAGGATCTTCATCTGTACTATT
CTCTCATGGAATTCCGCCACAATCTGATGCTAGAATACCTCGAACCGCTGGAATCGCAGCGGATAGAAGAACAGCCGAGA
CTATCGGATCTGCTCGCGGATATTGATAAAAAGCAGGCCCGGCTGACCGGACGGCTTGATTATTATTTTAATTTTTTCCG
GGGGATGTATGAGCTGGAATGCCGTGAGTATCTTTCAGCCATTCAGTTTTTTAAGAAAGCTGAAAGCAAACTGACGTACG
TTAAAGATCATATAGAAAAAGCTGAATTTTACTTTAAAATGTCAGAAGTCTATTATTATATGAAACAAACTTATGTATCG
ATGGATTATGCGCGGCAGGCTTATTTAATTTATAAAGATGAAAAAAAATACAATATTAGATTAACCCAGTGCCATTCTTT
ATTTGGGGCTAATTATCTTGATGTAAAGCAATACGATCACGCGATTTCCCACTTTCAAAAGGCATATACGATGGCTGAAT
TGGAGCAGCAGCCGCAATTAATGGGAAGAACACTTTTTAACATCGCTTTATGCCATAATAATCAAAACAATAAAGTCGAG
GCTATTCCCCATTTAAAAGAAGCCATAGCTGTTTTTGAAAAAGCTCAAATGAGCCATTCACTTCCGCAGCCCTACTTCTT
ACTTACACAGATTTATTTTAAGTTAGAAAATATAGATAATGCGTACGATTATCATAAAAAAGGTATCTCAATATGTAAGG
AAATAGATGATATAATTTACGAGGAAAAATTTAAATTTTTGGAATATTTATATATGCCGGATCCAAGAGATACATTAATA
AACGATTGTCTGCATTTTCTTGAAAGTAAATTGATGTATGCTGATATTGAGGAATTAGCCCTTGATGTAGCTAAATATTA
TTACACAAAAGAAGAATATAAAAAAGCTTCTGTCTACTTTTTAAAAGTTGAAGAAGCCAGACAGCAGATCGAAGGAGGAG
TGAATTTATATGAAATTGAAGTATAA

Domains

Predicted by InterproScan.

• response regulator aspartate phosphatase H, N terminal (RapH_N) (5-65)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapF	Bacillus subtilis subsp. subtilis str. 168	70.079	100	0.701
rapC	Bacillus subtilis subsp. subtilis str. 168	53.421	99.738	0.533