Detailed information NTG0166331

Bioinformatically predicted

Overview

• Name: tsaP
• Type: Machinery gene
• Locus tag: BG483_RS00100
• Genome accession: NZ_CP017099
• Coordinates: 21248..22273 (+)
• Length: 341 a.a.
• NCBI ID: WP_003097294.1
• Uniprot ID: A0A0H2ZJL6
• Organism: Pseudomonas aeruginosa strain DN1
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 16248..27273

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
BG483_RS00075 (BG483_00075)	-	16438..16755 (-)	318	WP_003097288.1	tetratricopeptide repeat protein	-
BG483_RS00080 (BG483_00080)	trkA	16903..18276 (-)	1374	WP_003111375.1	Trk system potassium transporter TrkA	-
BG483_RS00085 (BG483_00085)	rsmB	18303..19607 (-)	1305	WP_023100691.1	16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB	-
BG483_RS00090 (BG483_00090)	fmt	19604..20548 (-)	945	WP_023100692.1	methionyl-tRNA formyltransferase	-
BG483_RS00095 (BG483_00095)	def	20603..21109 (-)	507	WP_003097293.1	peptide deformylase	-
BG483_RS00100 (BG483_00100)	tsaP	21248..22273 (+)	1026	WP_003097294.1	LysM peptidoglycan-binding domain-containing protein	Machinery gene
BG483_RS00105 (BG483_00105)	dprA	22408..23496 (+)	1089	WP_023100693.1	DNA-processing protein DprA	Machinery gene
BG483_RS00110 (BG483_00110)	-	23537..24094 (+)	558	WP_003097300.1	L-threonylcarbamoyladenylate synthase	-
BG483_RS00115 (BG483_00115)	-	24104..25081 (-)	978	WP_023100694.1	NADPH:quinone reductase	-
BG483_RS00120 (BG483_00120)	hemF	25272..26189 (+)	918	WP_003097311.1	oxygen-dependent coproporphyrinogen oxidase	-
BG483_RS00125 (BG483_00125)	aroE	26247..27071 (+)	825	WP_003097314.1	shikimate dehydrogenase	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37586.01 Da
• Isoelectric Point: 9.3358

>NTDB_id=166331 BG483_RS00100 WP_003097294.1 21248..22273(+) (tsaP) [Pseudomonas aeruginosa strain DN1]
MRKSLVALLLLAASGLAQAQVDLREGHPDRYTVVRGDTLWDISGKFLRQPWKWPELWHANPQIQNPHLIYPGDTLSLVYV
DGQPRLVLNRGESRGTIKLSPKIRSTPIAEAIPTIPLDKINSFLLANRIVDDEKTFTSAPYIVAGNAERIVSGTGDRIYA
RGKFADGQPAYGIFRQGKVYIDPKTKEVLGINADDIGGGEVVATEGDVATLALTRTTQEVRLGDRLFPTEERAVNSTFMP
GEPSREVKGEIIDVPRGVTQIGQFDVVTLNRGQRDGLAEGNVLAIYKVGETVRDRVTGESVKIPDERAGLLMVFRTYKKL
SYALVLMASRPLSVTDRVQNP

Nucleotide

• Length: 1026 bp

>NTDB_id=166331 BG483_RS00100 WP_003097294.1 21248..22273(+) (tsaP) [Pseudomonas aeruginosa strain DN1]
ATGAGGAAATCACTAGTCGCCCTTCTGCTCCTTGCCGCGAGCGGTCTGGCGCAGGCCCAGGTCGACCTCAGGGAAGGGCA
TCCGGACCGCTACACGGTGGTCAGGGGCGATACCCTGTGGGACATCTCGGGGAAATTCCTCCGCCAGCCATGGAAGTGGC
CGGAACTCTGGCACGCCAACCCGCAGATCCAGAATCCCCACCTGATCTACCCCGGCGACACCCTCAGCCTGGTTTACGTC
GATGGCCAGCCGCGCCTGGTGCTGAACCGTGGCGAATCGCGCGGGACCATCAAGCTGTCGCCGAAGATCCGCAGCACGCC
GATCGCCGAGGCTATCCCGACCATCCCGCTGGACAAGATCAACAGCTTCCTGCTGGCCAACCGCATCGTCGATGACGAGA
AGACCTTCACCAGTGCGCCGTACATCGTCGCCGGCAACGCCGAGCGGATCGTCAGCGGCACCGGCGACCGCATCTACGCC
CGCGGCAAGTTCGCCGACGGCCAGCCGGCCTATGGCATCTTCCGCCAGGGCAAGGTCTACATCGATCCGAAGACCAAGGA
AGTCCTCGGCATCAACGCCGACGACATCGGCGGCGGCGAGGTGGTGGCCACCGAAGGCGACGTCGCGACCCTGGCGCTGA
CCCGCACCACCCAGGAAGTGCGCCTGGGCGACCGCCTGTTCCCCACCGAGGAGCGTGCGGTGAATTCCACCTTCATGCCC
GGCGAGCCGAGCCGCGAGGTGAAGGGCGAAATCATCGACGTACCGCGCGGCGTGACCCAGATCGGCCAGTTCGACGTGGT
CACCCTGAACCGTGGCCAGCGCGACGGGCTGGCCGAGGGCAACGTGCTGGCGATCTACAAGGTCGGCGAGACGGTGCGCG
ACCGCGTTACCGGTGAGTCGGTGAAGATTCCCGACGAACGCGCCGGCCTGCTGATGGTGTTCCGTACCTACAAGAAGCTG
AGCTACGCCCTGGTTCTGATGGCCAGCAGGCCGCTCTCGGTAACCGACAGGGTGCAGAATCCCTGA

Domains

Predicted by InterProScan.

• LysM domain (LysM) (31-76)

3D structure

• AlphaFold DB: A0A0H2ZJL6

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
tsaP	Acinetobacter baumannii D1279779	36.512	100	0.393