Detailed information NTG0166328

Bioinformatically predicted

Overview

• Name: recA
• Type: Machinery gene
• Locus tag: AVT04_RS04620
• Genome accession: NZ_CP013939
• Coordinates: 866857..868011 (-)
• Length: 384 a.a.
• NCBI ID: WP_011226746.1
• Uniprot ID: Q5M1Y2
• Organism: Streptococcus thermophilus strain S9
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 861857..873011

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AVT04_RS04615 (AVT04_04615)	spx	866282..866680 (-)	399	WP_002949058.1	transcriptional regulator Spx	-
AVT04_RS04620 (AVT04_04620)	recA	866857..868011 (-)	1155	WP_011226746.1	recombinase RecA	Machinery gene
AVT04_RS04625 (AVT04_04625)	cinA	868047..869318 (-)	1272	WP_011226745.1	competence/damage-inducible protein A	Machinery gene
AVT04_RS04630 (AVT04_04630)	-	869414..869969 (-)	556	Protein_859	DNA-3-methyladenine glycosylase I	-
AVT04_RS04635 (AVT04_04635)	ruvA	869976..870566 (-)	591	WP_002949053.1	Holliday junction branch migration protein RuvA	-
AVT04_RS04640 (AVT04_04640)	-	870718..870939 (-)	222	WP_041826940.1	hypothetical protein	-

Sequence

Protein

• Length: 384 a.a.
• Molecular weight: 41427.01 Da
• Isoelectric Point: 4.6956

>NTDB_id=166328 AVT04_RS04620 WP_011226746.1 866857..868011(-) (recA) [Streptococcus thermophilus strain S9]
MAKKTKKTEEITKKFGDERLKALDDALKNIEKDFGKGAVMRLGERAEQKVQVMSSGSLALDIALGAGGYPKGRIIEIYGP
ESSGKTTVALHAVAQTQKEGGIAAFIDAEHALDPAYAAALGVNIDELLLSQPDSGEQGLEIAGKLIDSGAVDLVVVDSVA
ALVPRAEIDGDIGDSHVGLQARMMSQAMRKLSASINKTKTIAIFINQLREKVGIMFGNPETTPGGRALKFYASVRLDVRG
NTQIKGTGDKKDQNVGKETKIKVVKNKVAPPFKEAFVEIMYGEGISQTGELVKIASDIGIIQKAGAWFSYNGEKIGQGSE
NAKKYLADHPEIFAEIDHKVRVHYGLVELDEDDVVEDTQVEDTQVEDTSDELILDLDSTIEIEE

Nucleotide

• Length: 1155 bp

>NTDB_id=166328 AVT04_RS04620 WP_011226746.1 866857..868011(-) (recA) [Streptococcus thermophilus strain S9]
GTGGCTAAGAAAACAAAGAAAACAGAAGAAATCACAAAGAAGTTTGGTGATGAGCGTCTCAAAGCACTCGACGATGCATT
AAAAAACATTGAAAAAGATTTTGGTAAGGGTGCAGTTATGCGTCTTGGTGAGCGTGCAGAGCAAAAAGTTCAGGTTATGA
GCTCAGGCTCGCTAGCTTTGGATATTGCTCTTGGTGCGGGTGGTTACCCTAAAGGTCGTATTATTGAAATTTACGGACCA
GAATCATCAGGTAAAACAACTGTTGCCCTTCATGCAGTTGCTCAGACTCAAAAAGAAGGTGGCATCGCAGCTTTTATCGA
TGCCGAGCATGCTCTTGACCCTGCGTATGCAGCAGCTCTAGGTGTTAATATCGATGAGCTTCTTTTGTCGCAGCCTGATT
CTGGTGAGCAAGGTCTCGAAATTGCAGGTAAGCTGATTGACTCTGGTGCAGTGGATTTAGTTGTTGTTGACTCAGTTGCG
GCCTTGGTACCACGTGCAGAAATTGATGGAGATATTGGTGACAGTCATGTAGGACTTCAAGCGCGTATGATGAGTCAAGC
CATGCGTAAACTTTCTGCATCTATTAATAAAACAAAAACGATTGCTATCTTTATTAACCAGTTGCGTGAAAAAGTTGGTA
TCATGTTTGGTAACCCAGAGACTACCCCAGGTGGACGTGCTTTAAAATTCTATGCATCAGTACGTCTTGATGTACGTGGT
AATACACAAATTAAAGGAACCGGTGACAAAAAGGACCAAAATGTTGGTAAGGAAACCAAGATTAAGGTTGTTAAAAACAA
AGTTGCTCCACCATTTAAAGAAGCTTTTGTTGAAATTATGTATGGCGAAGGAATTTCACAAACCGGTGAACTTGTAAAAA
TTGCAAGTGATATAGGCATTATTCAGAAAGCCGGAGCTTGGTTCTCATATAATGGGGAGAAAATTGGTCAAGGATCTGAA
AATGCTAAAAAGTATTTAGCAGATCACCCTGAGATTTTTGCAGAAATCGATCATAAAGTACGCGTACACTACGGTCTGGT
TGAGCTAGATGAGGACGATGTTGTTGAAGATACACAAGTTGAAGACACACAAGTTGAAGACACGTCTGATGAACTCATTC
TAGATCTTGATTCAACCATTGAAATCGAAGAATAA

Domains

Predicted by InterproScan.

• recA bacterial DNA recombination protein (RecA) (21-286)

3D structure

• AlphaFold DB: Q5M1Y2

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recA	Streptococcus mutans UA159	88.052	100	0.883
recA	Streptococcus pyogenes NZ131	87.76	100	0.878
recA	Streptococcus mitis SK321	85.64	99.74	0.854
recA	Streptococcus mitis NCTC 12261	85.64	99.74	0.854
recA	Streptococcus pneumoniae Rx1	84.715	100	0.852
recA	Streptococcus pneumoniae D39	84.715	100	0.852
recA	Streptococcus pneumoniae R6	84.715	100	0.852
recA	Streptococcus pneumoniae TIGR4	84.715	100	0.852
recA	Lactococcus lactis subsp. cremoris KW2	77.62	91.927	0.714
recA	Latilactobacillus sakei subsp. sakei 23K	67.919	90.104	0.612
recA	Bacillus subtilis subsp. subtilis str. 168	67.781	85.677	0.581
recA	Neisseria gonorrhoeae MS11	59.827	90.104	0.539
recA	Neisseria gonorrhoeae MS11	59.827	90.104	0.539
recA	Neisseria gonorrhoeae strain FA1090	59.827	90.104	0.539
recA	Riemerella anatipestifer ATCC 11845 = DSM 15868	60.177	88.281	0.531
recA	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	62.539	84.115	0.526
recA	Glaesserella parasuis strain SC1401	59.412	88.542	0.526
recA	Acinetobacter baylyi ADP1	62.154	84.635	0.526
recA	Acinetobacter baumannii D1279779	62.154	84.635	0.526
recA	Vibrio cholerae O1 biovar El Tor strain E7946	61.231	84.635	0.518
recA	Vibrio cholerae strain A1552	61.231	84.635	0.518
recA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	56.305	88.802	0.5
recA	Ralstonia pseudosolanacearum GMI1000	57.576	85.938	0.495
recA	Pseudomonas stutzeri DSM 10701	59.19	83.594	0.495
recA	Helicobacter pylori strain NCTC11637	56.667	85.938	0.487
recA	Helicobacter pylori 26695	56.667	85.938	0.487