Detailed information
Bioinformatically predicted
Overview
| Name | pepF | Type | Regulator |
| Locus tag | AUC65_RS04110 | Genome accession | NZ_CP013936 |
| Coordinates | 896493..898307 (+) | Length | 604 a.a. |
| NCBI ID | WP_010372513.1 | Uniprot ID | - |
| Organism | Weissella cibaria strain CMU | ||
| Function | degradation of XIP; competence shut-off (predicted from homology) Competence regulation |
||
Genomic Context
Location: 891493..903307
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AUC65_RS04085 (AUC65_00830) | - | 891743..892060 (+) | 318 | WP_010372498.1 | PTS sugar transporter subunit IIB | - |
| AUC65_RS04090 (AUC65_00831) | - | 892106..892429 (+) | 324 | WP_010372502.1 | PTS lactose/cellobiose transporter subunit IIA | - |
| AUC65_RS04095 (AUC65_00832) | - | 892435..893886 (+) | 1452 | WP_010372504.1 | 6-phospho-beta-glucosidase | - |
| AUC65_RS04100 (AUC65_00833) | - | 893953..895317 (+) | 1365 | WP_010372507.1 | PTS sugar transporter subunit IIC | - |
| AUC65_RS04105 (AUC65_00834) | - | 895455..896453 (+) | 999 | WP_197458866.1 | competence protein CoiA | - |
| AUC65_RS04110 (AUC65_00835) | pepF | 896493..898307 (+) | 1815 | WP_010372513.1 | oligoendopeptidase F | Regulator |
| AUC65_RS04115 (AUC65_00836) | - | 898397..899116 (-) | 720 | WP_010372516.1 | MIP/aquaporin family protein | - |
| AUC65_RS04120 (AUC65_00837) | - | 899424..899813 (+) | 390 | WP_010372520.1 | DUF948 domain-containing protein | - |
| AUC65_RS04125 (AUC65_00838) | - | 899829..900401 (+) | 573 | WP_010372524.1 | hypothetical protein | - |
| AUC65_RS04130 (AUC65_00839) | ccpA | 900460..901461 (-) | 1002 | WP_010373031.1 | catabolite control protein A | - |
| AUC65_RS04135 (AUC65_00840) | - | 901713..902813 (+) | 1101 | WP_010373028.1 | M24 family metallopeptidase | - |
Sequence
Protein
Download Length: 604 a.a. Molecular weight: 67749.61 Da Isoelectric Point: 4.2890
>NTDB_id=166286 AUC65_RS04110 WP_010372513.1 896493..898307(+) (pepF) [Weissella cibaria strain CMU]
MAKELPLRDALPESMTWNLQTIFASDEAWEDAFEELADRLESADFFVQSATTSGTDLYNALQYGLGVMRDLEKLYVYASM
KSDQDTANAYYQGLSNRAEALAARVSAAIAFFDPAVLSLSEAELTAFFEAEPKLGAYKHYFESILTQQGHVLTPDQEALL
AAAGDVFGASERTFGVLDNADIKFEAVANEDGELETLSNGVYSRLLESTDPEVRRNAFQTFYKSYVSLENTFASLIASHV
KGHNFMAAVHNYDNAREAALAGNHVPEVVYDTLVAEVNEALPLLHRYVALRKQLLGLDELHSYDLYTPILGEPDFTIDYE
SAQAEALKALAPLGEDYLEVVNTAFDNRWIDVIENKGKRSGAYSGGSYDTNPFILLNWVDNLNNLSTLVHEMGHSVHSYL
TRQNQPYHYGDYPIFLAEIASTTNENLLTDYLLKTVTDKKLRAYILNQYLDGVKGTVFRQTQFAEFEQWMHVTDAQGVPL
TADVLDEAYGELNRRYYGPALTFDDEIAHEWERIPHFYYNFYVFQYSTGFAAATAMADKILTEGAPAVAAYKEYLKAGSS
AFPIDVMKKAGLDMTKPDYLRDTFKVFEQRLNEFEALVAELAAE
MAKELPLRDALPESMTWNLQTIFASDEAWEDAFEELADRLESADFFVQSATTSGTDLYNALQYGLGVMRDLEKLYVYASM
KSDQDTANAYYQGLSNRAEALAARVSAAIAFFDPAVLSLSEAELTAFFEAEPKLGAYKHYFESILTQQGHVLTPDQEALL
AAAGDVFGASERTFGVLDNADIKFEAVANEDGELETLSNGVYSRLLESTDPEVRRNAFQTFYKSYVSLENTFASLIASHV
KGHNFMAAVHNYDNAREAALAGNHVPEVVYDTLVAEVNEALPLLHRYVALRKQLLGLDELHSYDLYTPILGEPDFTIDYE
SAQAEALKALAPLGEDYLEVVNTAFDNRWIDVIENKGKRSGAYSGGSYDTNPFILLNWVDNLNNLSTLVHEMGHSVHSYL
TRQNQPYHYGDYPIFLAEIASTTNENLLTDYLLKTVTDKKLRAYILNQYLDGVKGTVFRQTQFAEFEQWMHVTDAQGVPL
TADVLDEAYGELNRRYYGPALTFDDEIAHEWERIPHFYYNFYVFQYSTGFAAATAMADKILTEGAPAVAAYKEYLKAGSS
AFPIDVMKKAGLDMTKPDYLRDTFKVFEQRLNEFEALVAELAAE
Nucleotide
Download Length: 1815 bp
>NTDB_id=166286 AUC65_RS04110 WP_010372513.1 896493..898307(+) (pepF) [Weissella cibaria strain CMU]
ATGGCCAAAGAATTACCATTACGAGATGCATTGCCTGAGTCAATGACTTGGAATTTGCAGACAATTTTTGCTTCTGATGA
AGCGTGGGAAGATGCCTTTGAAGAATTGGCCGATCGGTTAGAGTCAGCGGATTTCTTCGTCCAATCAGCAACGACGTCTG
GTACAGATTTGTACAATGCGTTGCAATACGGTTTGGGTGTGATGCGTGACTTAGAAAAGCTGTATGTCTATGCTTCAATG
AAGTCAGACCAAGATACAGCCAACGCTTATTATCAAGGGTTGAGCAATCGAGCTGAAGCCTTGGCAGCACGTGTTTCGGC
AGCCATTGCATTCTTTGATCCAGCTGTTTTGTCACTTTCAGAAGCTGAATTAACGGCCTTTTTTGAAGCAGAGCCTAAGC
TGGGGGCGTATAAGCATTACTTCGAGAGCATCTTGACGCAACAAGGTCACGTCTTAACGCCAGACCAAGAAGCATTGTTA
GCTGCTGCTGGGGATGTTTTTGGGGCGTCAGAACGGACATTTGGTGTGTTGGATAATGCCGATATTAAGTTTGAAGCTGT
TGCCAACGAAGATGGTGAACTGGAGACGTTGTCAAACGGTGTCTATTCACGTTTATTGGAGTCGACTGACCCGGAAGTAC
GTCGAAATGCTTTCCAAACGTTCTACAAGTCATATGTCTCACTTGAAAATACCTTTGCATCTTTGATTGCCAGTCACGTG
AAGGGTCATAACTTTATGGCGGCGGTTCACAACTATGATAATGCGCGTGAAGCTGCTTTAGCTGGTAACCATGTGCCAGA
AGTGGTGTACGATACATTGGTGGCGGAAGTAAATGAAGCGTTGCCGTTGTTGCATCGTTACGTTGCCCTCCGAAAGCAAT
TGTTGGGCTTGGACGAATTGCACTCATACGATTTGTATACCCCAATTTTGGGCGAACCTGACTTTACGATTGATTACGAA
TCTGCCCAGGCTGAAGCATTGAAGGCGTTGGCACCATTGGGCGAAGATTATCTGGAAGTTGTCAATACAGCCTTTGATAA
TCGTTGGATTGATGTCATTGAGAATAAGGGCAAGCGTTCAGGAGCCTACTCGGGCGGTTCATATGATACAAATCCATTCA
TTTTGCTGAACTGGGTTGATAACCTGAACAATTTGAGCACTTTAGTTCACGAAATGGGCCACTCAGTGCACTCATATTTG
ACTCGTCAAAATCAGCCTTACCACTACGGCGATTACCCAATCTTCTTGGCTGAAATTGCGTCAACGACGAACGAAAACTT
GTTGACGGATTACTTGCTTAAGACGGTGACGGATAAGAAGTTGCGTGCATATATCTTGAATCAGTACTTGGATGGTGTGA
AGGGAACGGTCTTCCGTCAAACCCAATTTGCAGAGTTTGAGCAATGGATGCACGTGACGGATGCGCAAGGCGTGCCATTG
ACTGCTGATGTTTTGGATGAGGCCTATGGTGAACTTAACCGACGTTACTACGGCCCAGCCTTGACGTTTGATGATGAAAT
TGCGCACGAGTGGGAGCGTATTCCACACTTCTACTACAACTTCTACGTGTTCCAATACAGTACTGGTTTTGCTGCTGCGA
CGGCAATGGCGGATAAGATTTTGACTGAAGGGGCACCGGCTGTGGCGGCTTACAAGGAATACTTGAAGGCCGGATCATCT
GCATTCCCAATCGATGTGATGAAGAAGGCCGGGCTTGATATGACTAAGCCAGATTACTTGCGTGATACATTCAAAGTGTT
CGAACAGCGCTTGAACGAATTTGAAGCGTTGGTGGCAGAATTAGCTGCTGAATAA
ATGGCCAAAGAATTACCATTACGAGATGCATTGCCTGAGTCAATGACTTGGAATTTGCAGACAATTTTTGCTTCTGATGA
AGCGTGGGAAGATGCCTTTGAAGAATTGGCCGATCGGTTAGAGTCAGCGGATTTCTTCGTCCAATCAGCAACGACGTCTG
GTACAGATTTGTACAATGCGTTGCAATACGGTTTGGGTGTGATGCGTGACTTAGAAAAGCTGTATGTCTATGCTTCAATG
AAGTCAGACCAAGATACAGCCAACGCTTATTATCAAGGGTTGAGCAATCGAGCTGAAGCCTTGGCAGCACGTGTTTCGGC
AGCCATTGCATTCTTTGATCCAGCTGTTTTGTCACTTTCAGAAGCTGAATTAACGGCCTTTTTTGAAGCAGAGCCTAAGC
TGGGGGCGTATAAGCATTACTTCGAGAGCATCTTGACGCAACAAGGTCACGTCTTAACGCCAGACCAAGAAGCATTGTTA
GCTGCTGCTGGGGATGTTTTTGGGGCGTCAGAACGGACATTTGGTGTGTTGGATAATGCCGATATTAAGTTTGAAGCTGT
TGCCAACGAAGATGGTGAACTGGAGACGTTGTCAAACGGTGTCTATTCACGTTTATTGGAGTCGACTGACCCGGAAGTAC
GTCGAAATGCTTTCCAAACGTTCTACAAGTCATATGTCTCACTTGAAAATACCTTTGCATCTTTGATTGCCAGTCACGTG
AAGGGTCATAACTTTATGGCGGCGGTTCACAACTATGATAATGCGCGTGAAGCTGCTTTAGCTGGTAACCATGTGCCAGA
AGTGGTGTACGATACATTGGTGGCGGAAGTAAATGAAGCGTTGCCGTTGTTGCATCGTTACGTTGCCCTCCGAAAGCAAT
TGTTGGGCTTGGACGAATTGCACTCATACGATTTGTATACCCCAATTTTGGGCGAACCTGACTTTACGATTGATTACGAA
TCTGCCCAGGCTGAAGCATTGAAGGCGTTGGCACCATTGGGCGAAGATTATCTGGAAGTTGTCAATACAGCCTTTGATAA
TCGTTGGATTGATGTCATTGAGAATAAGGGCAAGCGTTCAGGAGCCTACTCGGGCGGTTCATATGATACAAATCCATTCA
TTTTGCTGAACTGGGTTGATAACCTGAACAATTTGAGCACTTTAGTTCACGAAATGGGCCACTCAGTGCACTCATATTTG
ACTCGTCAAAATCAGCCTTACCACTACGGCGATTACCCAATCTTCTTGGCTGAAATTGCGTCAACGACGAACGAAAACTT
GTTGACGGATTACTTGCTTAAGACGGTGACGGATAAGAAGTTGCGTGCATATATCTTGAATCAGTACTTGGATGGTGTGA
AGGGAACGGTCTTCCGTCAAACCCAATTTGCAGAGTTTGAGCAATGGATGCACGTGACGGATGCGCAAGGCGTGCCATTG
ACTGCTGATGTTTTGGATGAGGCCTATGGTGAACTTAACCGACGTTACTACGGCCCAGCCTTGACGTTTGATGATGAAAT
TGCGCACGAGTGGGAGCGTATTCCACACTTCTACTACAACTTCTACGTGTTCCAATACAGTACTGGTTTTGCTGCTGCGA
CGGCAATGGCGGATAAGATTTTGACTGAAGGGGCACCGGCTGTGGCGGCTTACAAGGAATACTTGAAGGCCGGATCATCT
GCATTCCCAATCGATGTGATGAAGAAGGCCGGGCTTGATATGACTAAGCCAGATTACTTGCGTGATACATTCAAAGTGTT
CGAACAGCGCTTGAACGAATTTGAAGCGTTGGTGGCAGAATTAGCTGCTGAATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pepF | Streptococcus salivarius strain HSISS4 |
53.299 |
97.848 |
0.522 |