Detailed information    

insolico Bioinformatically predicted

Overview


Name   luxS   Type   Regulator
Locus tag   A2U18_RS11445 Genome accession   NZ_CP017091
Coordinates   2213920..2214390 (+) Length   156 a.a.
NCBI ID   WP_000164421.1    Uniprot ID   P65329
Organism   Staphylococcus aureus strain ISU926 isolate ST398     
Function   induction of competence (predicted from homology)   
Competence regulation

Genomic Context


Location: 2208920..2219390
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  A2U18_RS11425 (A2U18_11100) coaW 2209231..2210034 (+) 804 WP_000862732.1 type II pantothenate kinase -
  A2U18_RS11430 (A2U18_11105) - 2210164..2210835 (-) 672 WP_000120549.1 DUF2750 domain-containing protein -
  A2U18_RS11435 (A2U18_11110) ldmS 2211234..2212427 (-) 1194 WP_000183714.1 L-aspartate--L-methionine ligase LdmS -
  A2U18_RS11440 (A2U18_11115) - 2212427..2213611 (-) 1185 WP_001291508.1 M20 family metallopeptidase -
  A2U18_RS11445 (A2U18_11120) luxS 2213920..2214390 (+) 471 WP_000164421.1 S-ribosylhomocysteine lyase Regulator
  A2U18_RS11450 (A2U18_11125) - 2214542..2214892 (-) 351 WP_001024035.1 DoxX family protein -
  A2U18_RS11455 (A2U18_11130) - 2214906..2216207 (-) 1302 WP_001242303.1 pyrimidine-nucleoside phosphorylase -
  A2U18_RS11465 (A2U18_11140) deoC 2216487..2217149 (-) 663 WP_001083328.1 deoxyribose-phosphate aldolase -
  A2U18_RS11470 (A2U18_11145) deoD 2217463..2218173 (+) 711 WP_000160304.1 purine-nucleoside phosphorylase -
  A2U18_RS11475 (A2U18_11150) - 2218294..2218737 (-) 444 WP_000070865.1 Dps family protein -
  A2U18_RS11480 (A2U18_11155) - 2218937..2219350 (-) 414 WP_001123309.1 thiol-disulfide oxidoreductase DCC family protein -

Sequence


Protein


Download         Length: 156 a.a.        Molecular weight: 17513.76 Da        Isoelectric Point: 5.4567

>NTDB_id=166235 A2U18_RS11445 WP_000164421.1 2213920..2214390(+) (luxS) [Staphylococcus aureus strain ISU926 isolate ST398]
MTKMNVESFNLDHTKVVAPFIRLAGTMEGLNGDVIHKYDIRFKQPNKEHMDMPGLHSLEHLMAENIRNHSDKVVDLSPMG
CQTGFYVSFINHDNYDDVLNIVEATLNDVLNATEVPACNEVQCGWAASHSLEGAKTIAQAFLDKRNEWHDVFGTGK

Nucleotide


Download         Length: 471 bp        

>NTDB_id=166235 A2U18_RS11445 WP_000164421.1 2213920..2214390(+) (luxS) [Staphylococcus aureus strain ISU926 isolate ST398]
ATGACAAAAATGAATGTTGAAAGTTTCAATTTAGATCATACTAAAGTGGTTGCCCCATTTATTAGATTAGCGGGAACGAT
GGAAGGATTAAACGGAGATGTCATTCACAAATACGACATTCGTTTCAAACAACCAAACAAAGAACATATGGATATGCCAG
GATTGCATTCATTAGAACATTTAATGGCTGAAAATATTAGAAATCATAGTGACAAAGTCGTTGATTTAAGTCCTATGGGT
TGCCAAACTGGTTTCTATGTATCATTTATTAATCATGATAATTATGATGATGTATTAAATATTGTTGAAGCAACTTTAAA
TGATGTGCTAAATGCTACTGAAGTGCCAGCTTGTAATGAAGTACAATGTGGCTGGGCAGCTAGTCATTCATTAGAAGGTG
CTAAAACTATCGCTCAAGCATTTCTAGACAAACGAAACGAATGGCATGATGTTTTCGGTACAGGAAAATAA

Domains


Predicted by InterProScan.

(5-148)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB P65329

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  luxS Vibrio cholerae strain A1552

44.681

90.385

0.404


Multiple sequence alignment