Detailed information
Bioinformatically predicted
Overview
| Name | xcpV | Type | Machinery gene |
| Locus tag | KBNAB1_RS11105 | Genome accession | NZ_CP013924 |
| Coordinates | 2294062..2294442 (-) | Length | 126 a.a. |
| NCBI ID | WP_000836911.1 | Uniprot ID | - |
| Organism | Acinetobacter baumannii strain KBN10P02143 | ||
| Function | pseudopilus assembly (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2289062..2299442
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| KBNAB1_RS11075 (KBNAB1_2188) | tadA | 2289180..2289683 (-) | 504 | WP_000033178.1 | tRNA adenosine(34) deaminase TadA | - |
| KBNAB1_RS11080 (KBNAB1_2189) | - | 2289690..2290814 (-) | 1125 | WP_001983908.1 | enoyl-CoA hydratase/isomerase family protein | - |
| KBNAB1_RS11085 (KBNAB1_2190) | ung | 2290811..2291524 (-) | 714 | WP_001177528.1 | uracil-DNA glycosylase | - |
| KBNAB1_RS11090 (KBNAB1_2191) | - | 2291575..2292171 (-) | 597 | WP_000908452.1 | 6-pyruvoyl trahydropterin synthase family protein | - |
| KBNAB1_RS11095 (KBNAB1_2192) | gspK | 2292402..2293361 (-) | 960 | WP_000301476.1 | type II secretion system minor pseudopilin GspK | - |
| KBNAB1_RS11100 (KBNAB1_2193) | xcpW | 2293361..2294062 (-) | 702 | WP_000594589.1 | type II secretion system minor pseudopilin GspJ | Machinery gene |
| KBNAB1_RS11105 (KBNAB1_2194) | xcpV | 2294062..2294442 (-) | 381 | WP_000836911.1 | type II secretion system minor pseudopilin GspI | Machinery gene |
| KBNAB1_RS11110 (KBNAB1_2195) | - | 2294432..2294986 (-) | 555 | WP_000841373.1 | type II secretion system protein | - |
| KBNAB1_RS11115 (KBNAB1_2196) | - | 2294996..2295604 (-) | 609 | WP_000375838.1 | TetR/AcrR family transcriptional regulator | - |
| KBNAB1_RS11120 (KBNAB1_2197) | - | 2295642..2296415 (-) | 774 | WP_000497298.1 | TatD family hydrolase | - |
| KBNAB1_RS11125 (KBNAB1_2198) | - | 2296433..2296774 (-) | 342 | WP_001183024.1 | PilZ domain-containing protein | - |
| KBNAB1_RS11130 (KBNAB1_2199) | - | 2296786..2297766 (-) | 981 | WP_001075411.1 | DNA polymerase III subunit delta' | - |
| KBNAB1_RS11135 (KBNAB1_2200) | kdsB | 2297778..2298539 (-) | 762 | WP_000680697.1 | 3-deoxy-manno-octulosonate cytidylyltransferase | - |
Sequence
Protein
Download Length: 126 a.a. Molecular weight: 13975.20 Da Isoelectric Point: 9.8004
>NTDB_id=166161 KBNAB1_RS11105 WP_000836911.1 2294062..2294442(-) (xcpV) [Acinetobacter baumannii strain KBN10P02143]
MKSKGFTLLEVMVALAIFAVAAVALTKVAMQYTQSTSNAILRTKAQFVAMNEVAMMEINQEWLQGTQSKQVTSQGETWQI
DKSAQSTISPNVQKIDLQVSLYDPDKGKVQNGITHMVFFNYPVKAK
MKSKGFTLLEVMVALAIFAVAAVALTKVAMQYTQSTSNAILRTKAQFVAMNEVAMMEINQEWLQGTQSKQVTSQGETWQI
DKSAQSTISPNVQKIDLQVSLYDPDKGKVQNGITHMVFFNYPVKAK
Nucleotide
Download Length: 381 bp
>NTDB_id=166161 KBNAB1_RS11105 WP_000836911.1 2294062..2294442(-) (xcpV) [Acinetobacter baumannii strain KBN10P02143]
ATGAAATCTAAAGGCTTTACCCTCTTAGAAGTTATGGTTGCTTTGGCAATCTTTGCAGTCGCAGCTGTCGCTTTAACTAA
AGTGGCAATGCAGTACACGCAGTCCACTTCAAATGCAATTTTGCGAACCAAAGCTCAATTTGTAGCAATGAATGAAGTTG
CTATGATGGAGATTAATCAAGAATGGTTGCAAGGAACCCAGAGTAAGCAAGTAACTTCCCAAGGTGAAACTTGGCAAATT
GATAAGTCAGCTCAATCTACTATTAGCCCGAATGTTCAAAAAATTGATTTACAAGTGAGTTTGTATGATCCGGATAAGGG
AAAAGTACAAAATGGCATTACTCATATGGTCTTTTTTAATTATCCAGTGAAAGCAAAATAA
ATGAAATCTAAAGGCTTTACCCTCTTAGAAGTTATGGTTGCTTTGGCAATCTTTGCAGTCGCAGCTGTCGCTTTAACTAA
AGTGGCAATGCAGTACACGCAGTCCACTTCAAATGCAATTTTGCGAACCAAAGCTCAATTTGTAGCAATGAATGAAGTTG
CTATGATGGAGATTAATCAAGAATGGTTGCAAGGAACCCAGAGTAAGCAAGTAACTTCCCAAGGTGAAACTTGGCAAATT
GATAAGTCAGCTCAATCTACTATTAGCCCGAATGTTCAAAAAATTGATTTACAAGTGAGTTTGTATGATCCGGATAAGGG
AAAAGTACAAAATGGCATTACTCATATGGTCTTTTTTAATTATCCAGTGAAAGCAAAATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| xcpV | Acinetobacter baumannii D1279779 |
100 |
100 |
1 |