Detailed information NTG0166160

Bioinformatically predicted

Overview

• Name: xcpW
• Type: Machinery gene
• Locus tag: KBNAB1_RS11100
• Genome accession: NZ_CP013924
• Coordinates: 2293361..2294062 (-)
• Length: 233 a.a.
• NCBI ID: WP_000594589.1
• Uniprot ID: A0A9P3CZ31
• Organism: Acinetobacter baumannii strain KBN10P02143
• Function: pseudopilus assembly (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2288361..2299062

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
KBNAB1_RS11070 (KBNAB1_2187)	-	2288667..2289110 (-)	444	WP_001246675.1	SRPBCC family protein	-
KBNAB1_RS11075 (KBNAB1_2188)	tadA	2289180..2289683 (-)	504	WP_000033178.1	tRNA adenosine(34) deaminase TadA	-
KBNAB1_RS11080 (KBNAB1_2189)	-	2289690..2290814 (-)	1125	WP_001983908.1	enoyl-CoA hydratase/isomerase family protein	-
KBNAB1_RS11085 (KBNAB1_2190)	ung	2290811..2291524 (-)	714	WP_001177528.1	uracil-DNA glycosylase	-
KBNAB1_RS11090 (KBNAB1_2191)	-	2291575..2292171 (-)	597	WP_000908452.1	6-pyruvoyl trahydropterin synthase family protein	-
KBNAB1_RS11095 (KBNAB1_2192)	gspK	2292402..2293361 (-)	960	WP_000301476.1	type II secretion system minor pseudopilin GspK	-
KBNAB1_RS11100 (KBNAB1_2193)	xcpW	2293361..2294062 (-)	702	WP_000594589.1	type II secretion system minor pseudopilin GspJ	Machinery gene
KBNAB1_RS11105 (KBNAB1_2194)	xcpV	2294062..2294442 (-)	381	WP_000836911.1	type II secretion system minor pseudopilin GspI	Machinery gene
KBNAB1_RS11110 (KBNAB1_2195)	-	2294432..2294986 (-)	555	WP_000841373.1	type II secretion system protein	-
KBNAB1_RS11115 (KBNAB1_2196)	-	2294996..2295604 (-)	609	WP_000375838.1	TetR/AcrR family transcriptional regulator	-
KBNAB1_RS11120 (KBNAB1_2197)	-	2295642..2296415 (-)	774	WP_000497298.1	TatD family hydrolase	-
KBNAB1_RS11125 (KBNAB1_2198)	-	2296433..2296774 (-)	342	WP_001183024.1	PilZ domain-containing protein	-
KBNAB1_RS11130 (KBNAB1_2199)	-	2296786..2297766 (-)	981	WP_001075411.1	DNA polymerase III subunit delta'	-
KBNAB1_RS11135 (KBNAB1_2200)	kdsB	2297778..2298539 (-)	762	WP_000680697.1	3-deoxy-manno-octulosonate cytidylyltransferase	-

Sequence

Protein

• Length: 233 a.a.
• Molecular weight: 26639.58 Da
• Isoelectric Point: 9.3468

>NTDB_id=166160 KBNAB1_RS11100 WP_000594589.1 2293361..2294062(-) (xcpW) [Acinetobacter baumannii strain KBN10P02143]
MIKNKYIHIRSIDSRLAARSSSARLTRASGFTLVELLVAIAIFAVLSLLGWKIFDYLLKVRDRNAEHEVHLFELQDAYQQ
ILRDTLQIIPLSANQGGQLHPALEIDNQILRFSKAGVTDPLKQGLSPFERIEYRYDADQKKLYRLKYTNLNTSNREQPLS
STLLSQVDQYQIMVLTPQEVTKWPEVNIDPTKPNELKKLPKGIKIQLTVAGVNYEWIYSLNQGDLSLSQEGNS

Nucleotide

• Length: 702 bp

>NTDB_id=166160 KBNAB1_RS11100 WP_000594589.1 2293361..2294062(-) (xcpW) [Acinetobacter baumannii strain KBN10P02143]
ATGATAAAAAATAAATATATTCACATCCGAAGCATTGATTCTCGCCTTGCAGCACGATCGAGCAGTGCTCGATTAACTCG
CGCCTCAGGATTTACTTTGGTTGAATTGTTAGTCGCGATCGCTATCTTTGCGGTTTTATCTTTATTGGGGTGGAAAATTT
TCGATTACTTGCTCAAAGTTCGTGATCGTAATGCCGAACATGAAGTGCATTTATTTGAATTACAAGATGCTTATCAACAA
ATTCTTCGTGATACTTTGCAGATTATCCCTTTATCCGCAAACCAAGGTGGTCAACTTCATCCAGCTTTAGAAATCGATAA
TCAAATTTTACGTTTTAGCAAAGCAGGCGTAACGGATCCTTTAAAACAAGGCTTATCACCATTTGAACGAATTGAATATC
GTTATGATGCAGACCAAAAAAAATTATATCGTCTTAAATATACAAATTTGAATACTTCGAACAGAGAGCAACCTTTATCG
AGTACTTTGTTAAGTCAAGTCGACCAATATCAGATTATGGTTTTGACTCCGCAAGAAGTCACAAAATGGCCCGAGGTTAA
TATTGATCCAACGAAACCTAATGAGTTAAAAAAATTACCGAAAGGGATAAAAATCCAACTTACAGTCGCTGGTGTAAATT
ATGAGTGGATTTATAGCTTAAATCAGGGTGACTTATCGCTTTCGCAGGAAGGTAATTCATAA

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (27-49)

• Type II secretion system (T2SS), protein J (T2SSJ) (83-212)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xcpW	Acinetobacter baumannii D1279779	99.571	100	0.996