Detailed information    

insolico Bioinformatically predicted

Overview


Name   luxS   Type   Regulator
Locus tag   A2V17_RS11450 Genome accession   NZ_CP017090
Coordinates   2230893..2231363 (+) Length   156 a.a.
NCBI ID   WP_000164421.1    Uniprot ID   P65329
Organism   Staphylococcus aureus strain ISU935 isolate ST5     
Function   induction of competence (predicted from homology)   
Competence regulation

Genomic Context


Location: 2225893..2236363
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  A2V17_RS11430 (A2V17_11255) coaW 2226201..2227004 (+) 804 WP_088401731.1 type II pantothenate kinase -
  A2V17_RS11435 (A2V17_11260) - 2227135..2227806 (-) 672 WP_000120549.1 DUF2750 domain-containing protein -
  A2V17_RS11440 (A2V17_11265) ldmS 2228205..2229398 (-) 1194 WP_064140124.1 L-aspartate--L-methionine ligase LdmS -
  A2V17_RS11445 (A2V17_11270) - 2229398..2230582 (-) 1185 WP_001291497.1 M20 family metallopeptidase -
  A2V17_RS11450 (A2V17_11275) luxS 2230893..2231363 (+) 471 WP_000164421.1 S-ribosylhomocysteine lyase Regulator
  A2V17_RS11455 (A2V17_11280) - 2231515..2231865 (-) 351 WP_001024035.1 DoxX family protein -
  A2V17_RS11460 (A2V17_11285) - 2231879..2233180 (-) 1302 WP_001242311.1 pyrimidine-nucleoside phosphorylase -
  A2V17_RS11470 (A2V17_11295) deoC 2233459..2234121 (-) 663 WP_001083318.1 deoxyribose-phosphate aldolase -
  A2V17_RS11475 (A2V17_11300) deoD 2234435..2235145 (+) 711 WP_000160304.1 purine-nucleoside phosphorylase -
  A2V17_RS11480 (A2V17_11305) - 2235266..2235709 (-) 444 WP_000070866.1 Dps family protein -
  A2V17_RS11485 (A2V17_11310) - 2235909..2236322 (-) 414 WP_001123303.1 thiol-disulfide oxidoreductase DCC family protein -

Sequence


Protein


Download         Length: 156 a.a.        Molecular weight: 17513.76 Da        Isoelectric Point: 5.4567

>NTDB_id=166149 A2V17_RS11450 WP_000164421.1 2230893..2231363(+) (luxS) [Staphylococcus aureus strain ISU935 isolate ST5]
MTKMNVESFNLDHTKVVAPFIRLAGTMEGLNGDVIHKYDIRFKQPNKEHMDMPGLHSLEHLMAENIRNHSDKVVDLSPMG
CQTGFYVSFINHDNYDDVLNIVEATLNDVLNATEVPACNEVQCGWAASHSLEGAKTIAQAFLDKRNEWHDVFGTGK

Nucleotide


Download         Length: 471 bp        

>NTDB_id=166149 A2V17_RS11450 WP_000164421.1 2230893..2231363(+) (luxS) [Staphylococcus aureus strain ISU935 isolate ST5]
ATGACAAAAATGAATGTTGAAAGTTTCAATTTAGATCATACTAAAGTGGTTGCCCCATTTATTAGATTAGCGGGAACGAT
GGAAGGATTAAACGGAGATGTCATTCACAAATACGACATTCGTTTCAAACAACCAAACAAAGAACATATGGATATGCCAG
GACTACATTCATTAGAACATTTAATGGCTGAAAATATTAGAAATCATAGTGACAAAGTTGTTGATTTAAGTCCTATGGGT
TGCCAAACTGGTTTCTATGTATCATTTATTAATCATGATAATTATGATGATGTATTAAATATTGTTGAAGCAACTTTAAA
TGATGTGCTAAATGCTACTGAAGTGCCTGCTTGTAATGAAGTACAATGTGGCTGGGCAGCAAGTCATTCATTAGAAGGTG
CTAAAACTATCGCTCAAGCATTTCTAGACAAACGAAACGAATGGCATGATGTTTTCGGTACAGGAAAATAA

Domains


Predicted by InterProScan.

(5-148)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB P65329

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  luxS Vibrio cholerae strain A1552

44.681

90.385

0.404


Multiple sequence alignment