Detailed information
Bioinformatically predicted
Overview
| Name | fimU | Type | Machinery gene |
| Locus tag | KBNAB1_RS01580 | Genome accession | NZ_CP013924 |
| Coordinates | 339525..339998 (+) | Length | 157 a.a. |
| NCBI ID | WP_001214061.1 | Uniprot ID | A0A219CC01 |
| Organism | Acinetobacter baumannii strain KBN10P02143 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 334525..344998
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| KBNAB1_RS01560 (KBNAB1_0299) | - | 334989..337094 (-) | 2106 | WP_001117590.1 | RelA/SpoT family protein | - |
| KBNAB1_RS20580 | - | 337134..337263 (-) | 130 | Protein_301 | hypothetical protein | - |
| KBNAB1_RS01565 (KBNAB1_0300) | rpoZ | 337302..337580 (-) | 279 | WP_000135049.1 | DNA-directed RNA polymerase subunit omega | - |
| KBNAB1_RS01570 (KBNAB1_0301) | gmk | 337653..338282 (-) | 630 | WP_000015937.1 | guanylate kinase | - |
| KBNAB1_RS01575 (KBNAB1_0302) | ispH | 338405..339355 (+) | 951 | WP_000407064.1 | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase | - |
| KBNAB1_RS01580 (KBNAB1_0303) | fimU | 339525..339998 (+) | 474 | WP_001214061.1 | pilus assembly FimT family protein | Machinery gene |
| KBNAB1_RS01585 (KBNAB1_0304) | pilV | 339992..340552 (+) | 561 | WP_085916952.1 | type IV pilus modification protein PilV | Machinery gene |
| KBNAB1_RS01590 (KBNAB1_0305) | pilW | 340553..341554 (+) | 1002 | WP_000079200.1 | PilW family protein | Machinery gene |
| KBNAB1_RS01595 (KBNAB1_0306) | pilX | 341551..342369 (+) | 819 | WP_000149374.1 | PilX N-terminal domain-containing pilus assembly protein | Machinery gene |
Sequence
Protein
Download Length: 157 a.a. Molecular weight: 16836.40 Da Isoelectric Point: 8.5355
>NTDB_id=166145 KBNAB1_RS01580 WP_001214061.1 339525..339998(+) (fimU) [Acinetobacter baumannii strain KBN10P02143]
MRGIIPQEGFTLVELMVTIAVMAIIALMAAPSMSNLLESKRLDANQRDLINTLSEAKSQAILGRQNVSVNLNSTASNTPT
SLNWQTASNNTLELKNIAADGTQSSLTTTTLAFNANGVVANITQDTLLSICNSRINKKKVIILSKLGTLVFKAEENC
MRGIIPQEGFTLVELMVTIAVMAIIALMAAPSMSNLLESKRLDANQRDLINTLSEAKSQAILGRQNVSVNLNSTASNTPT
SLNWQTASNNTLELKNIAADGTQSSLTTTTLAFNANGVVANITQDTLLSICNSRINKKKVIILSKLGTLVFKAEENC
Nucleotide
Download Length: 474 bp
>NTDB_id=166145 KBNAB1_RS01580 WP_001214061.1 339525..339998(+) (fimU) [Acinetobacter baumannii strain KBN10P02143]
ATGAGGGGAATTATTCCACAAGAAGGGTTCACCTTGGTCGAGCTAATGGTGACGATTGCGGTCATGGCTATTATTGCACT
GATGGCTGCACCATCAATGTCAAATTTATTAGAAAGTAAACGTTTAGATGCTAATCAAAGAGACTTAATCAACACTTTAT
CAGAAGCGAAAAGTCAGGCAATTTTAGGACGTCAGAATGTTTCTGTTAACTTGAACTCAACAGCTTCAAATACACCCACT
TCATTAAATTGGCAGACAGCTTCTAATAATACTCTTGAGCTAAAAAATATAGCCGCTGATGGTACGCAAAGTTCTTTAAC
GACTACTACTTTAGCTTTTAACGCAAATGGAGTAGTGGCAAATATAACTCAAGATACGCTTTTATCTATTTGTAATTCTA
GAATAAATAAAAAGAAAGTCATTATTTTGTCCAAGCTTGGCACTTTGGTTTTTAAGGCCGAGGAGAATTGTTAA
ATGAGGGGAATTATTCCACAAGAAGGGTTCACCTTGGTCGAGCTAATGGTGACGATTGCGGTCATGGCTATTATTGCACT
GATGGCTGCACCATCAATGTCAAATTTATTAGAAAGTAAACGTTTAGATGCTAATCAAAGAGACTTAATCAACACTTTAT
CAGAAGCGAAAAGTCAGGCAATTTTAGGACGTCAGAATGTTTCTGTTAACTTGAACTCAACAGCTTCAAATACACCCACT
TCATTAAATTGGCAGACAGCTTCTAATAATACTCTTGAGCTAAAAAATATAGCCGCTGATGGTACGCAAAGTTCTTTAAC
GACTACTACTTTAGCTTTTAACGCAAATGGAGTAGTGGCAAATATAACTCAAGATACGCTTTTATCTATTTGTAATTCTA
GAATAAATAAAAAGAAAGTCATTATTTTGTCCAAGCTTGGCACTTTGGTTTTTAAGGCCGAGGAGAATTGTTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| fimU | Acinetobacter baumannii D1279779 |
98.726 |
100 |
0.987 |