Detailed information    

insolico Bioinformatically predicted

Overview

Name   dinR/lexA   Type   Regulator
Locus tag   A2V17_RS06985 Genome accession   NZ_CP017090
Coordinates   1376265..1376888 (-) Length   207 a.a.
NCBI ID   WP_001208755.1    Uniprot ID   P65819
Organism   Staphylococcus aureus strain ISU935 isolate ST5     
Function   repressor of recA; repressor of dinR (predicted from homology)   
Homologous recombination

Genomic Context

Location: 1371265..1381888
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  A2V17_RS06960 (A2V17_06825) rpmG 1372841..1372990 (+) 150 WP_001265708.1 50S ribosomal protein L33 -
  A2V17_RS06965 (A2V17_06830) rpsN 1373444..1373713 (+) 270 WP_088401698.1 30S ribosomal protein S14 -
  A2V17_RS06970 (A2V17_06835) guaC 1373870..1374847 (+) 978 WP_000688122.1 GMP reductase -
  A2V17_RS06980 (A2V17_06845) - 1374869..1375885 (+) 1017 WP_001797872.1 CAP domain-containing protein -
  A2V17_RS06985 (A2V17_06850) dinR/lexA 1376265..1376888 (-) 624 WP_001208755.1 transcriptional repressor LexA Regulator
  A2V17_RS06990 (A2V17_06855) sosA 1377031..1377264 (+) 234 WP_000499650.1 DNA damage-induced cell division inhibitor SosA -
  A2V17_RS06995 (A2V17_06860) - 1377401..1377640 (+) 240 WP_000071351.1 DUF896 domain-containing protein -
  A2V17_RS07000 (A2V17_06865) recP/tkt 1377761..1379749 (+) 1989 WP_000481443.1 transketolase Machinery gene
  A2V17_RS07005 (A2V17_06870) - 1380027..1380269 (+) 243 WP_000246909.1 YneF family protein -
  A2V17_RS07010 (A2V17_06875) - 1380256..1380354 (+) 99 WP_001789897.1 hypothetical protein -
  A2V17_RS07015 (A2V17_06880) - 1380448..1380915 (+) 468 WP_000966142.1 CcdC family protein -

Sequence

Protein


Download         Length: 207 a.a.        Molecular weight: 23331.55 Da        Isoelectric Point: 4.8811

>NTDB_id=166111 A2V17_RS06985 WP_001208755.1 1376265..1376888(-) (dinR/lexA) [Staphylococcus aureus strain ISU935 isolate ST5]
MRELTKRQSEIYNYIKQVVQMKGYPPSVREIGEAVGLASSSTVHGHLSRLEEKGYIRRDPTKPRAIEIVSDQTNDNINME
ETIHVPVIGKVTAGVPITAVENIEEYFPLPEHLTSTHNSDIFILNVVGDSMIEAGILDGDKVIVRSQTIAENGDIIVAMT
EEDEATVKRFYKEKNRYRLQPENSTMEPIYLDNVAVIGKVIGLYREM

Nucleotide


Download         Length: 624 bp        

>NTDB_id=166111 A2V17_RS06985 WP_001208755.1 1376265..1376888(-) (dinR/lexA) [Staphylococcus aureus strain ISU935 isolate ST5]
ATGAGAGAATTAACAAAACGACAAAGCGAAATATATAACTATATTAAACAAGTTGTTCAAATGAAAGGTTATCCGCCTAG
TGTTCGCGAAATTGGTGAAGCAGTTGGCTTAGCATCCAGTTCAACTGTTCATGGTCATCTTTCACGTCTTGAAGAAAAAG
GATATATAAGAAGAGATCCAACGAAACCACGTGCTATAGAAATTGTAAGTGATCAAACAAATGATAATATTAATATGGAA
GAAACGATTCATGTGCCAGTTATTGGTAAAGTCACAGCAGGTGTTCCTATTACCGCTGTAGAAAATATTGAAGAGTATTT
TCCATTACCTGAACACTTAACATCGACACATAATAGCGACATATTCATATTAAACGTCGTAGGCGACAGTATGATTGAGG
CTGGTATATTAGACGGAGACAAAGTAATTGTTCGCAGTCAAACCATAGCAGAAAATGGAGACATTATTGTTGCTATGACT
GAGGAAGATGAAGCAACTGTCAAACGCTTCTATAAAGAAAAAAATCGTTATCGATTACAACCTGAAAATAGTACAATGGA
GCCAATTTACCTCGACAATGTTGCTGTAATTGGGAAAGTAATTGGTTTGTACCGCGAAATGTAA

Domains

Predicted by InterProScan.

LexA DNA binding domain (LexA_DNA_bind)

(1-65)

Peptidase S24-like (Peptidase_S24)

(86-201)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB P65819

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  dinR/lexA Bacillus subtilis subsp. subtilis str. 168

66.341

99.034

0.657