Detailed information    

insolico Bioinformatically predicted

Overview


Name   pptA   Type   Regulator
Locus tag   AV644_RS02345 Genome accession   NZ_CP013908
Coordinates   395566..396291 (+) Length   241 a.a.
NCBI ID   WP_000912310.1    Uniprot ID   A0AB74H7X3
Organism   Streptococcus agalactiae strain GBS-M002     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context


Location: 390566..401291
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AV644_RS02310 (AV644_02220) tsaE 391368..391811 (+) 444 WP_000500161.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE -
  AV644_RS02315 (AV644_02225) - 391804..392325 (+) 522 WP_000043146.1 GNAT family N-acetyltransferase -
  AV644_RS02320 (AV644_02230) brpA 392334..393641 (+) 1308 WP_000708156.1 biofilm formation/cell division transcriptional regulator BrpA -
  AV644_RS02325 (AV644_02235) - 393705..394001 (-) 297 WP_000690175.1 hypothetical protein -
  AV644_RS02330 (AV644_02240) - 393998..394417 (-) 420 WP_000368097.1 HIT family protein -
  AV644_RS02335 (AV644_02245) - 394753..395256 (+) 504 WP_000773453.1 hypothetical protein -
  AV644_RS02340 - 395308..395494 (-) 187 Protein_371 hypothetical protein -
  AV644_RS02345 (AV644_02250) pptA 395566..396291 (+) 726 WP_000912310.1 ABC transporter ATP-binding protein Regulator
  AV644_RS02350 (AV644_02255) pptB 396293..397327 (+) 1035 WP_000732713.1 ABC transporter permease Regulator
  AV644_RS02355 (AV644_02260) ccrZ 397385..398185 (+) 801 WP_000155919.1 cell cycle regulator CcrZ -
  AV644_RS02360 (AV644_02265) trmB 398175..398810 (+) 636 WP_001266024.1 tRNA (guanosine(46)-N7)-methyltransferase TrmB -
  AV644_RS02370 (AV644_02275) rimP 399300..399776 (+) 477 WP_041971671.1 ribosome maturation factor RimP -
  AV644_RS02375 (AV644_02280) nusA 399812..400963 (+) 1152 WP_000032295.1 transcription termination factor NusA -
  AV644_RS02380 (AV644_02285) rnpM 400985..401281 (+) 297 WP_001140526.1 RNase P modulator RnpM -

Sequence


Protein


Download         Length: 241 a.a.        Molecular weight: 26893.30 Da        Isoelectric Point: 4.5217

>NTDB_id=165924 AV644_RS02345 WP_000912310.1 395566..396291(+) (pptA) [Streptococcus agalactiae strain GBS-M002]
MLKIENVTGGYVNIPVLKNISFEVNDGELVGLIGLNGAGKSTTINEIIGILRPYQGDITIDGISLEADQELYRKKIGFIP
ETPSLYEELTLREHLETVAMAYDIATDEVMERAQKLLEMFRLTDKLDWFPMHFSKGMKQKVMIICAFVVSPSLFIVDEPF
LGLDPLAISDLINLLAEEKAKGKSILMSTHVLDSAEKMCDRFVILHKGEIRAVGTLEELRAIFGDSNANLNDIYIALTKE
V

Nucleotide


Download         Length: 726 bp        

>NTDB_id=165924 AV644_RS02345 WP_000912310.1 395566..396291(+) (pptA) [Streptococcus agalactiae strain GBS-M002]
ATGTTAAAAATTGAAAATGTTACAGGGGGGTATGTTAATATCCCAGTTTTAAAAAATATTTCTTTTGAAGTAAATGATGG
AGAGTTAGTTGGATTAATTGGGCTTAATGGTGCAGGAAAATCAACCACTATTAACGAGATTATTGGTATTTTGAGACCCT
ATCAAGGAGATATTACAATTGATGGTATTAGTCTTGAAGCCGACCAAGAACTTTATAGAAAGAAAATAGGCTTTATTCCT
GAGACACCAAGTCTCTATGAGGAACTAACTCTCAGGGAACATTTAGAAACGGTAGCTATGGCGTATGATATTGCCACCGA
TGAAGTTATGGAACGTGCGCAAAAACTATTAGAGATGTTTCGTCTAACAGATAAATTAGACTGGTTTCCAATGCATTTTT
CAAAGGGAATGAAACAAAAGGTTATGATTATTTGTGCTTTTGTTGTATCTCCAAGTTTATTTATTGTTGATGAACCATTT
TTAGGTTTGGATCCACTAGCTATTTCAGATTTGATTAATCTTCTAGCAGAAGAAAAAGCTAAAGGGAAATCTATTTTGAT
GTCAACGCACGTATTAGATTCTGCCGAAAAAATGTGTGATCGTTTTGTTATTTTACATAAAGGAGAAATACGGGCAGTTG
GAACCCTAGAGGAATTACGGGCTATTTTTGGAGACAGTAATGCTAATTTAAATGACATCTACATAGCTCTGACAAAAGAG
GTGTGA

Domains


Predicted by InterproScan.

(17-160)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus thermophilus LMD-9

77.406

99.17

0.768

  pptA Streptococcus salivarius strain HSISS4

77.406

99.17

0.768


Multiple sequence alignment