Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0J   Type   Regulator
Locus tag   BARD7_RS18240 Genome accession   NZ_CP016913
Coordinates   3678317..3679168 (-) Length   283 a.a.
NCBI ID   WP_065982828.1    Uniprot ID   -
Organism   Bacillus amyloliquefaciens strain RD7-7     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 3673317..3684168
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BARD7_RS18220 (BARD7_03709) - 3673678..3675681 (-) 2004 WP_065982826.1 molybdopterin-dependent oxidoreductase -
  BARD7_RS18225 (BARD7_03710) - 3675728..3675934 (-) 207 WP_004392973.1 DUF951 domain-containing protein -
  BARD7_RS18230 (BARD7_03711) - 3676020..3677024 (-) 1005 WP_065982827.1 hypothetical protein -
  BARD7_RS18235 (BARD7_03712) yyaC 3677673..3678287 (+) 615 WP_013354269.1 spore protease YyaC -
  BARD7_RS18240 (BARD7_03713) spo0J 3678317..3679168 (-) 852 WP_065982828.1 ParB/RepB/Spo0J family partition protein Regulator
  BARD7_RS18245 (BARD7_03714) soj 3679161..3679922 (-) 762 WP_004392964.1 sporulation initiation inhibitor protein Soj -
  BARD7_RS18250 (BARD7_03715) noc 3680221..3681072 (-) 852 WP_065982829.1 nucleoid occlusion protein -
  BARD7_RS18255 (BARD7_03716) rsmG 3681194..3681913 (-) 720 WP_065982830.1 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG -
  BARD7_RS18260 (BARD7_03717) mnmG 3681927..3683813 (-) 1887 WP_004392959.1 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG -

Sequence

Protein


Download         Length: 283 a.a.        Molecular weight: 32324.26 Da        Isoelectric Point: 8.3471

>NTDB_id=165384 BARD7_RS18240 WP_065982828.1 3678317..3679168(-) (spo0J) [Bacillus amyloliquefaciens strain RD7-7]
MAKGGLGKGINALFNQVDLSEETVEEIKISDLRPNPYQPRKQFDDESLAELKESIIQHGILQPIIVRKSLKGYDIVAGER
RYRAAKLAGKETVPAIVRELSESLMREIALLENLQREDLSPLEEALAYDSLLKHLDITQEQLAKRLGKSRPHIANHLRLL
TLPESIQNLIAEGTLSMGHGRTLLGLKNKNKLEPLVKKVVEEQLNVRQLEQLIQQLNSNVPRETKKKDPVQDVVLKERES
YLQNYFGTTVNIKRQKKKGKIEIEFFSNEDLERILELLSEREA

Nucleotide


Download         Length: 852 bp        

>NTDB_id=165384 BARD7_RS18240 WP_065982828.1 3678317..3679168(-) (spo0J) [Bacillus amyloliquefaciens strain RD7-7]
ATGGCTAAAGGCGGGCTCGGAAAAGGGATTAATGCATTGTTTAATCAAGTTGATTTGTCTGAAGAGACAGTAGAAGAGAT
TAAGATCAGTGATTTGCGCCCCAATCCTTATCAGCCAAGAAAACAATTTGATGATGAGTCATTAGCTGAACTGAAGGAAT
CCATCATTCAGCATGGCATTCTTCAGCCCATTATCGTGAGAAAATCATTGAAGGGCTACGATATTGTAGCCGGCGAACGC
CGTTATCGCGCCGCAAAACTTGCCGGTAAAGAGACAGTGCCGGCTATCGTGCGGGAGTTATCTGAATCGCTGATGCGGGA
GATCGCCCTGTTGGAGAACCTTCAGCGGGAAGATTTATCGCCGCTTGAAGAAGCTCTTGCATATGATTCACTGCTGAAGC
ATTTGGATATCACCCAGGAGCAGCTAGCTAAACGGCTCGGGAAAAGCAGACCTCATATTGCCAACCATTTAAGGCTGCTG
ACGCTTCCTGAAAGTATCCAGAACCTCATTGCAGAAGGTACGTTATCCATGGGGCACGGCAGAACCTTGCTCGGTTTGAA
AAATAAAAATAAGCTTGAACCGCTTGTGAAGAAAGTTGTTGAAGAACAGCTTAACGTCCGTCAGCTCGAGCAGCTCATTC
AGCAATTAAACAGTAATGTTCCACGTGAAACAAAGAAAAAAGATCCTGTTCAAGATGTTGTGTTAAAAGAGCGGGAATCG
TATTTGCAAAATTACTTCGGAACAACAGTCAATATTAAGAGACAAAAGAAAAAGGGGAAAATTGAGATTGAGTTTTTCTC
AAATGAAGATCTTGAACGTATCCTTGAGCTTTTGTCTGAAAGAGAAGCGTAA

Domains

Predicted by InterProScan.

ParB/Sulfiredoxin domain (ParB_N)

(25-113)

HTH domain found in ParB protein (HTH_ParB)

(164-215)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0J Streptococcus mutans UA159

41.538

91.873

0.382