Detailed information    

insolico Bioinformatically predicted

Overview

Name   dinR/lexA   Type   Regulator
Locus tag   BARD7_RS08550 Genome accession   NZ_CP016913
Coordinates   1781915..1782535 (-) Length   206 a.a.
NCBI ID   WP_007611720.1    Uniprot ID   A0AAI8HP04
Organism   Bacillus amyloliquefaciens strain RD7-7     
Function   repressor of recA; repressor of dinR (predicted from homology)   
Homologous recombination

Genomic Context

Location: 1776915..1787535
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BARD7_RS08515 (BARD7_01748) - 1777323..1777562 (+) 240 WP_013352407.1 TM2 domain-containing protein -
  BARD7_RS08520 (BARD7_01749) - 1777734..1778168 (+) 435 WP_065981563.1 dUTP diphosphatase -
  BARD7_RS08525 (BARD7_01750) - 1778218..1778403 (-) 186 WP_013352409.1 DUF4177 domain-containing protein -
  BARD7_RS08530 (BARD7_01751) - 1778611..1779432 (+) 822 WP_065981564.1 poly-gamma-glutamate hydrolase family protein -
  BARD7_RS19115 (BARD7_01752) - 1779539..1779688 (+) 150 WP_013352411.1 hypothetical protein -
  BARD7_RS08535 (BARD7_01753) - 1779675..1780505 (+) 831 WP_045505921.1 prohibitin family protein -
  BARD7_RS08540 (BARD7_01754) - 1780533..1780982 (-) 450 WP_065981565.1 YndM family protein -
  BARD7_RS08545 (BARD7_01755) - 1781137..1781565 (+) 429 WP_065981566.1 hypothetical protein -
  BARD7_RS08550 (BARD7_01756) dinR/lexA 1781915..1782535 (-) 621 WP_007611720.1 transcriptional repressor LexA Regulator
  BARD7_RS08555 (BARD7_01757) yneA 1782691..1783002 (+) 312 WP_065981567.1 cell division suppressor protein YneA -
  BARD7_RS08560 (BARD7_01758) - 1783018..1783668 (+) 651 WP_065981568.1 YneB family resolvase-like protein -
  BARD7_RS08565 (BARD7_01759) - 1783737..1783970 (+) 234 WP_065981569.1 DUF896 domain-containing protein -
  BARD7_RS08570 (BARD7_01760) recP/tkt 1784137..1786140 (+) 2004 WP_065981570.1 transketolase Machinery gene
  BARD7_RS08575 (BARD7_01761) sirA 1786291..1786737 (+) 447 WP_065981571.1 sporulation inhibitor of replication protein SirA -
  BARD7_RS08580 (BARD7_01762) - 1786823..1787041 (+) 219 WP_003153994.1 YneF family protein -
  BARD7_RS08585 (BARD7_01763) - 1787115..1787288 (-) 174 WP_088030684.1 aspartyl-phosphate phosphatase Spo0E family protein -

Sequence

Protein


Download         Length: 206 a.a.        Molecular weight: 23046.64 Da        Isoelectric Point: 5.1645

>NTDB_id=165310 BARD7_RS08550 WP_007611720.1 1781915..1782535(-) (dinR/lexA) [Bacillus amyloliquefaciens strain RD7-7]
MTKLSKRQLDILRFIKEEVKTKGYPPSVREIGEAVGLASSSTVHGHLARLETKGLIRRDPTKPRAIEVLDEEEVQIPKSQ
VVNVPVIGKVTAGIPITAVENIDEYFPLPDRMVPPGEHVFMLEIMGESMIDAGIFDKDYVIVKQQNTANNGEIVVAMTED
DEATVKRFYKEDNYVRLQPENPTMEPIILQNVSILGKVIGVFRAVH

Nucleotide


Download         Length: 621 bp        

>NTDB_id=165310 BARD7_RS08550 WP_007611720.1 1781915..1782535(-) (dinR/lexA) [Bacillus amyloliquefaciens strain RD7-7]
ATGACGAAGCTATCAAAAAGGCAGCTTGATATCCTGCGTTTTATTAAAGAAGAGGTAAAAACGAAAGGATATCCGCCTTC
TGTAAGAGAGATAGGAGAAGCAGTAGGACTGGCTTCCAGTTCAACCGTGCACGGACATTTGGCACGGCTGGAGACAAAAG
GACTGATCAGACGGGACCCTACTAAACCGAGGGCAATTGAGGTATTGGATGAAGAAGAAGTCCAAATTCCGAAAAGCCAG
GTCGTAAATGTTCCGGTAATCGGGAAAGTGACGGCGGGTATTCCGATTACGGCTGTTGAAAATATCGATGAGTATTTTCC
GCTTCCTGACCGGATGGTTCCTCCGGGCGAACATGTATTTATGTTAGAAATCATGGGAGAAAGTATGATTGACGCCGGCA
TTTTTGACAAAGATTATGTCATTGTCAAACAGCAGAACACGGCTAATAACGGGGAAATCGTGGTGGCTATGACCGAAGAT
GATGAAGCGACGGTCAAGCGCTTCTATAAAGAGGACAATTATGTGCGGCTGCAGCCGGAAAATCCGACGATGGAACCGAT
TATCCTGCAAAACGTAAGCATTTTAGGGAAAGTCATCGGCGTATTCAGAGCCGTCCATTAA

Domains

Predicted by InterProScan.

Peptidase S24-like (Peptidase_S24)

(85-199)

LexA DNA binding domain (LexA_DNA_bind)

(1-65)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0AAI8HP04

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  dinR/lexA Bacillus subtilis subsp. subtilis str. 168

92.718

100

0.927