Detailed information
Bioinformatically predicted
Overview
| Name | pilH | Type | Machinery gene |
| Locus tag | BARD7_RS07710 | Genome accession | NZ_CP016913 |
| Coordinates | 1554425..1554787 (+) | Length | 120 a.a. |
| NCBI ID | WP_003154238.1 | Uniprot ID | A0A150FA43 |
| Organism | Bacillus amyloliquefaciens strain RD7-7 | ||
| Function | type IV pilus biogenesis and function (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1549425..1559787
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BARD7_RS07680 (BARD7_01571) | flgD | 1550340..1550771 (+) | 432 | WP_065981449.1 | flagellar hook assembly protein FlgD | - |
| BARD7_RS07685 (BARD7_01572) | flgG | 1550796..1551572 (+) | 777 | WP_013352263.1 | flagellar basal body rod protein FlgG | - |
| BARD7_RS07690 | - | 1551612..1551827 (+) | 216 | WP_013352264.1 | flagellar FlbD family protein | - |
| BARD7_RS07695 (BARD7_01573) | fliL | 1551824..1552243 (+) | 420 | WP_065981450.1 | flagellar basal body-associated protein FliL | - |
| BARD7_RS07700 (BARD7_01574) | fliM | 1552277..1553275 (+) | 999 | WP_065981451.1 | flagellar motor switch protein FliM | - |
| BARD7_RS07705 (BARD7_01575) | fliY | 1553265..1554398 (+) | 1134 | WP_065981452.1 | flagellar motor switch phosphatase FliY | - |
| BARD7_RS07710 (BARD7_01576) | pilH | 1554425..1554787 (+) | 363 | WP_003154238.1 | chemotaxis protein CheY | Machinery gene |
| BARD7_RS07715 (BARD7_01577) | fliZ | 1554802..1555455 (+) | 654 | WP_013352268.1 | flagella biosynthesis regulatory protein FliZ | - |
| BARD7_RS07720 (BARD7_01578) | fliP | 1555448..1556113 (+) | 666 | WP_065981453.1 | flagellar type III secretion system pore protein FliP | - |
| BARD7_RS07725 (BARD7_01579) | fliQ | 1556128..1556397 (+) | 270 | WP_013352270.1 | flagellar biosynthesis protein FliQ | - |
| BARD7_RS07730 (BARD7_01580) | fliR | 1556404..1557183 (+) | 780 | WP_045506167.1 | flagellar biosynthetic protein FliR | - |
| BARD7_RS07735 (BARD7_01581) | flhB | 1557183..1558262 (+) | 1080 | WP_065981454.1 | flagellar biosynthesis protein FlhB | - |
Sequence
Protein
Download Length: 120 a.a. Molecular weight: 13209.53 Da Isoelectric Point: 4.6805
>NTDB_id=165302 BARD7_RS07710 WP_003154238.1 1554425..1554787(+) (pilH) [Bacillus amyloliquefaciens strain RD7-7]
MAHRILIVDDAAFMRMMIKDILVKNGFDVVAEASDGAQAVEKFKEHSPDLVTMDITMPEMDGITALKEIKQIDPQAKIIM
CSAMGQQSMVIDAIQAGAKDFIVKPFQADRVLEAINKTLS
MAHRILIVDDAAFMRMMIKDILVKNGFDVVAEASDGAQAVEKFKEHSPDLVTMDITMPEMDGITALKEIKQIDPQAKIIM
CSAMGQQSMVIDAIQAGAKDFIVKPFQADRVLEAINKTLS
Nucleotide
Download Length: 363 bp
>NTDB_id=165302 BARD7_RS07710 WP_003154238.1 1554425..1554787(+) (pilH) [Bacillus amyloliquefaciens strain RD7-7]
ATGGCACACAGAATTTTAATTGTAGACGATGCAGCATTTATGAGAATGATGATCAAGGATATTTTAGTGAAGAACGGTTT
TGACGTTGTTGCTGAAGCTTCGGACGGAGCACAGGCGGTCGAAAAATTCAAAGAGCATTCACCTGACCTTGTGACAATGG
ATATTACAATGCCTGAAATGGACGGGATTACCGCATTAAAGGAAATTAAACAAATCGATCCGCAGGCGAAAATCATCATG
TGTTCGGCTATGGGGCAGCAGTCAATGGTTATTGACGCGATTCAAGCCGGCGCAAAAGACTTTATCGTGAAGCCATTCCA
AGCAGACCGCGTGCTTGAAGCTATTAATAAAACATTAAGCTAA
ATGGCACACAGAATTTTAATTGTAGACGATGCAGCATTTATGAGAATGATGATCAAGGATATTTTAGTGAAGAACGGTTT
TGACGTTGTTGCTGAAGCTTCGGACGGAGCACAGGCGGTCGAAAAATTCAAAGAGCATTCACCTGACCTTGTGACAATGG
ATATTACAATGCCTGAAATGGACGGGATTACCGCATTAAAGGAAATTAAACAAATCGATCCGCAGGCGAAAATCATCATG
TGTTCGGCTATGGGGCAGCAGTCAATGGTTATTGACGCGATTCAAGCCGGCGCAAAAGACTTTATCGTGAAGCCATTCCA
AGCAGACCGCGTGCTTGAAGCTATTAATAAAACATTAAGCTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilH | Synechocystis sp. PCC 6803 |
38.983 |
98.333 |
0.383 |