Detailed information    

insolico Bioinformatically predicted

Overview


Name   disA   Type   Machinery gene
Locus tag   BARD7_RS00590 Genome accession   NZ_CP016913
Coordinates   108097..109179 (+) Length   360 a.a.
NCBI ID   WP_014469611.1    Uniprot ID   -
Organism   Bacillus amyloliquefaciens strain RD7-7     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context


Location: 103097..114179
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BARD7_RS00575 (BARD7_00114) - 103097..104188 (+) 1092 WP_013350790.1 protein arginine kinase -
  BARD7_RS00580 (BARD7_00115) clpC 104185..106620 (+) 2436 WP_013350791.1 ATP-dependent protease ATP-binding subunit ClpC Regulator
  BARD7_RS00585 (BARD7_00116) radA/sms 106714..108093 (+) 1380 WP_065980549.1 DNA repair protein RadA Machinery gene
  BARD7_RS00590 (BARD7_00117) disA 108097..109179 (+) 1083 WP_014469611.1 DNA integrity scanning diadenylate cyclase DisA Machinery gene
  BARD7_RS00595 (BARD7_00118) - 109293..110393 (+) 1101 WP_065980550.1 PIN/TRAM domain-containing protein -
  BARD7_RS00600 (BARD7_00119) ispD 110407..111105 (+) 699 WP_065982836.1 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase -
  BARD7_RS00605 (BARD7_00120) ispF 111098..111574 (+) 477 WP_013350796.1 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase -
  BARD7_RS00610 (BARD7_00121) gltX 111666..113117 (+) 1452 WP_065980551.1 glutamate--tRNA ligase -
  BARD7_RS00615 (BARD7_00122) cysE 113428..114081 (+) 654 WP_003156410.1 serine O-acetyltransferase -

Sequence


Protein


Download         Length: 360 a.a.        Molecular weight: 40643.16 Da        Isoelectric Point: 5.5321

>NTDB_id=165245 BARD7_RS00590 WP_014469611.1 108097..109179(+) (disA) [Bacillus amyloliquefaciens strain RD7-7]
MEKEKKGAKQELDLSAILQFVAPGTPLRAGIENVLRANTGGLIVVGYNDKVKQVVDGGFHINTSFAPAHLYELAKMDGAI
ILSDSGQKILYANTQLMPEATISSSETGMRHRTAERVAKQTGCLVIAISERRNVITLYQDSMKYTLKDIGFILTKANQAI
QTLEKYKTILDKTITALNALEFEELVTFSDVLSVMHRYEMVLRIKNEINMYIKELGTEGHLIRLQVIELITDMEEEAALF
IKDYVKEKIKDPFVLLKELQDMSSYDLLDDSILFKLLGYPASTNLDDYVLPRGYRLLNKIPRLPMPIVENVVEAFGFLPS
ITEATAEELDDVEGIGEVRAQKIKKGLKRLQEKHYIDRQL

Nucleotide


Download         Length: 1083 bp        

>NTDB_id=165245 BARD7_RS00590 WP_014469611.1 108097..109179(+) (disA) [Bacillus amyloliquefaciens strain RD7-7]
ATGGAAAAAGAGAAAAAAGGGGCGAAACAAGAGCTTGACCTGTCTGCAATCCTGCAGTTCGTTGCACCGGGAACTCCGCT
CAGAGCCGGGATAGAAAATGTACTTCGGGCAAATACAGGCGGCCTGATTGTTGTCGGATACAACGATAAGGTAAAACAAG
TCGTGGATGGCGGTTTTCATATTAATACATCATTTGCGCCCGCTCACTTATACGAGCTGGCCAAAATGGACGGAGCCATT
ATTTTAAGTGATTCCGGCCAGAAAATTCTTTATGCGAATACGCAGCTTATGCCGGAGGCGACCATTTCTTCTTCAGAAAC
GGGAATGAGGCACCGTACGGCGGAACGGGTGGCGAAGCAGACCGGCTGTCTCGTCATAGCCATTTCTGAACGCAGAAATG
TCATTACGTTATACCAGGACAGCATGAAGTACACACTAAAGGACATAGGCTTTATTTTAACAAAGGCTAACCAGGCCATT
CAAACGCTTGAGAAGTATAAAACTATTTTAGACAAAACGATTACAGCTTTAAACGCATTAGAGTTTGAGGAGCTTGTGAC
ATTCAGTGACGTGCTGTCCGTCATGCACCGATATGAAATGGTGCTCCGTATAAAAAATGAAATCAACATGTATATTAAAG
AACTCGGAACGGAAGGCCACTTAATCCGTCTGCAGGTGATTGAACTGATTACGGATATGGAAGAAGAAGCGGCTCTTTTC
ATCAAAGACTATGTAAAAGAAAAAATCAAAGATCCGTTCGTGCTGTTAAAAGAGCTTCAGGATATGTCCAGCTATGATTT
GCTTGATGATTCCATTTTGTTTAAGCTGCTTGGATATCCCGCTTCTACTAATCTTGATGATTATGTCCTGCCGAGAGGAT
ACAGGCTGCTGAACAAAATCCCGCGTCTGCCGATGCCGATTGTTGAAAATGTGGTTGAGGCATTCGGATTTTTGCCAAGC
ATAACGGAAGCCACAGCCGAAGAGCTGGATGATGTTGAAGGTATCGGTGAGGTGCGCGCCCAAAAAATCAAAAAAGGCTT
AAAACGCCTCCAAGAAAAACACTATATAGATAGACAGCTTTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  disA Bacillus subtilis subsp. subtilis str. 168

94.722

100

0.947