Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   BSHJ0_RS21445 Genome accession   NZ_CP016894
Coordinates   4097104..4097793 (-) Length   229 a.a.
NCBI ID   WP_003243527.1    Uniprot ID   P42421
Organism   Bacillus subtilis strain HJ0-6     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 4092104..4102793
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BSHJ0_RS21425 (BSHJ0_04219) yxeA 4093009..4093356 (-) 348 WP_003227084.1 YxeA family protein -
  BSHJ0_RS21430 (BSHJ0_04220) yxdM 4093370..4095238 (-) 1869 WP_029318589.1 ABC transporter permease YxdM -
  BSHJ0_RS21435 (BSHJ0_04221) yxdL 4095213..4095986 (-) 774 WP_003243557.1 ABC transporter ATP-binding protein YxdL -
  BSHJ0_RS21440 (BSHJ0_04222) yxdK 4096130..4097107 (-) 978 WP_015385109.1 two-component system sensor histidine kinase YxdK -
  BSHJ0_RS21445 (BSHJ0_04223) braR 4097104..4097793 (-) 690 WP_003243527.1 two-component system response regulator YxdJ Regulator
  BSHJ0_RS21450 (BSHJ0_04224) iolJ 4097901..4098773 (-) 873 WP_014478478.1 6-phospho-5-dehydro-2-deoxy-D-gluconate aldolase -
  BSHJ0_RS21455 (BSHJ0_04225) iolI 4098794..4099630 (-) 837 WP_015715014.1 2-keto-myo-inositol isomerase -
  BSHJ0_RS21460 (BSHJ0_04226) iolH 4099716..4100585 (-) 870 WP_015250852.1 sugar phosphate isomerase/epimerase family protein -
  BSHJ0_RS21465 (BSHJ0_04227) iolG 4100605..4101639 (-) 1035 WP_014481414.1 bifunctional inositol 2-dehydrogenase/D-chiro-inositol 1-dehydrogenase -

Sequence

Protein


Download         Length: 229 a.a.        Molecular weight: 26600.34 Da        Isoelectric Point: 4.8564

>NTDB_id=165231 BSHJ0_RS21445 WP_003243527.1 4097104..4097793(-) (braR) [Bacillus subtilis strain HJ0-6]
MNKIMIVEDSEDIRGLLQNYLEKYGYQTVVAADFTAVLDVFLREKPDVVLLDINLPAYDGYYWCRQIRQHSTSPIIFISA
RSGEMDQVMAIENGGDDYIEKPFSYDIVLAKIKSQIRRAYGEYAAKQGEKVVEYAGVQLFVERFELRFQDEKSELSKKES
KLLEVLLERGEKVTSRDRLMEKTWDTDIFIDDNTLNVYITRLRKKLRELNAPVSIEAVRGEGYQLRAQS

Nucleotide


Download         Length: 690 bp        

>NTDB_id=165231 BSHJ0_RS21445 WP_003243527.1 4097104..4097793(-) (braR) [Bacillus subtilis strain HJ0-6]
TTGAATAAAATCATGATTGTGGAAGACAGTGAAGACATTCGCGGACTATTGCAGAATTACCTTGAAAAATACGGATATCA
AACAGTGGTCGCCGCGGATTTTACAGCTGTTCTTGATGTCTTTTTGCGGGAAAAGCCCGATGTGGTGCTGCTTGATATCA
ATTTGCCGGCATATGACGGATATTATTGGTGCCGGCAGATCCGCCAGCACTCCACAAGCCCGATCATCTTTATTTCTGCC
AGAAGCGGGGAAATGGATCAGGTGATGGCGATTGAAAATGGGGGAGACGATTATATCGAAAAACCGTTTTCTTATGATAT
TGTGCTTGCGAAAATCAAAAGCCAGATCCGGAGGGCGTACGGGGAGTACGCCGCAAAGCAGGGAGAGAAAGTGGTTGAAT
ATGCTGGCGTTCAGCTCTTTGTGGAACGGTTTGAACTGCGTTTTCAGGATGAAAAAAGCGAGCTTTCTAAAAAAGAAAGC
AAGCTTTTGGAAGTGCTGCTTGAGCGGGGAGAAAAGGTGACGAGTCGGGACCGTCTCATGGAAAAGACGTGGGACACCGA
CATATTCATCGATGATAATACACTTAACGTGTATATCACGCGGCTCAGAAAAAAACTGCGGGAGCTGAATGCGCCTGTTT
CTATTGAAGCGGTGCGGGGCGAAGGCTACCAGCTGAGGGCGCAGTCATGA

Domains

Predicted by InterProScan.

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(151-225)

Response regulator receiver domain (Response_reg)

(4-112)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB P42421

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

41.704

97.38

0.406