Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   BSHJ0_RS16410 Genome accession   NZ_CP016894
Coordinates   3119529..3120224 (-) Length   231 a.a.
NCBI ID   WP_003229133.1    Uniprot ID   -
Organism   Bacillus subtilis strain HJ0-6     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 3114529..3125224
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BSHJ0_RS16390 (BSHJ0_03226) yttA 3114956..3115702 (+) 747 WP_014480618.1 LMBR1 domain-containing protein -
  BSHJ0_RS16395 (BSHJ0_03227) bceB 3115739..3117679 (-) 1941 WP_038427854.1 bacitracin ABC transporter permease BceB -
  BSHJ0_RS16400 (BSHJ0_03228) bceA 3117669..3118430 (-) 762 WP_003229137.1 bacitracin ABC transporter ATP-binding protein BceA -
  BSHJ0_RS16405 (BSHJ0_03229) bceS 3118532..3119536 (-) 1005 WP_038427855.1 two-component sensor histidine kinase BceS -
  BSHJ0_RS16410 (BSHJ0_03230) braR 3119529..3120224 (-) 696 WP_003229133.1 two-component response regulator BceR Regulator
  BSHJ0_RS16415 (BSHJ0_03231) ytrF 3120321..3121631 (-) 1311 WP_038427856.1 ABC transporter permease YtrF -
  BSHJ0_RS16420 (BSHJ0_03232) ytrE 3121621..3122316 (-) 696 WP_003229129.1 ABC transporter ATP-binding protein YtrE -
  BSHJ0_RS16425 (BSHJ0_03233) ytrD 3122331..3123308 (-) 978 WP_029726913.1 ABC transporter permease YtrD -
  BSHJ0_RS16430 (BSHJ0_03234) ytrC 3123338..3124324 (-) 987 WP_029726914.1 ABC transporter permease YtrC -
  BSHJ0_RS16435 (BSHJ0_03235) ytrB 3124318..3125196 (-) 879 WP_003229123.1 ABC transporter ATP-binding protein YtrB -

Sequence

Protein


Download         Length: 231 a.a.        Molecular weight: 26865.76 Da        Isoelectric Point: 5.6471

>NTDB_id=165208 BSHJ0_RS16410 WP_003229133.1 3119529..3120224(-) (braR) [Bacillus subtilis strain HJ0-6]
MFKLLLIEDDESLFHEIKDRLTGWSYDVYGIQDFSQVLQEFAAVNPDCVIIDVQLPKFDGFHWCRLIRSRSNVPILFLSS
RDHPADMVMSMQLGADDFIQKPFHFDVLIAKIQAMFRRVHHYNTEPSTIKTWCGAAVDAEQNLVSNNKGSVELTKNEMFI
LKQLIEQKNKIVSREELIRSLWNDERFVSDNTLTVNVNRLRKKLDALQLGAYIETKVGQGYIAKEEDKFYD

Nucleotide


Download         Length: 696 bp        

>NTDB_id=165208 BSHJ0_RS16410 WP_003229133.1 3119529..3120224(-) (braR) [Bacillus subtilis strain HJ0-6]
TTGTTTAAACTTTTGCTGATTGAAGATGATGAATCGCTGTTTCATGAAATCAAGGATCGTTTAACGGGATGGTCCTATGA
TGTATACGGCATTCAGGATTTCAGTCAGGTGCTGCAGGAATTTGCGGCGGTTAATCCTGATTGTGTCATTATTGATGTGC
AGCTGCCTAAATTTGACGGTTTTCATTGGTGCCGGCTGATCCGCTCCCGGTCAAATGTTCCGATTCTCTTTTTATCCTCC
CGGGATCATCCTGCTGATATGGTGATGTCTATGCAGCTCGGGGCAGATGACTTTATTCAAAAACCATTTCATTTTGATGT
GCTGATCGCGAAAATCCAAGCGATGTTCCGGCGTGTGCACCATTATAATACGGAGCCGAGTACGATTAAAACGTGGTGCG
GCGCTGCTGTAGACGCGGAGCAGAACCTCGTCAGCAATAACAAAGGATCTGTTGAACTGACCAAAAATGAAATGTTCATT
CTAAAACAATTAATAGAGCAAAAAAACAAGATCGTCAGCCGGGAAGAGCTGATCAGAAGCTTGTGGAACGATGAGCGTTT
TGTTAGTGATAATACGCTGACCGTCAATGTCAATCGCCTGCGAAAAAAACTGGACGCCCTGCAGCTTGGCGCATATATCG
AGACAAAGGTGGGCCAGGGCTACATCGCGAAGGAAGAGGACAAGTTTTATGATTAA

Domains

Predicted by InterProScan.

Response regulator receiver domain (Response_reg)

(5-113)

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(150-222)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

39.545

95.238

0.377