Detailed information NTG0165098

Bioinformatically predicted

Overview

• Name: rapF
• Type: Regulator
• Locus tag: BSHJ0_RS01675
• Genome accession: NZ_CP016894
• Coordinates: 302501..303622 (+)
• Length: 373 a.a.
• NCBI ID: WP_015715201.1
• Uniprot ID: -
• Organism: Bacillus subtilis strain HJ0-6
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 297501..308622

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
BSHJ0_RS01655 (BSHJ0_00321)	ycdA	297506..298570 (-)	1065	WP_003234750.1	DUF4352 domain-containing protein	-
BSHJ0_RS22670	-	298593..298724 (-)	132	WP_003246334.1	hypothetical protein	-
BSHJ0_RS01660 (BSHJ0_00322)	ycdB	298898..300319 (+)	1422	WP_038427323.1	YcdB/YcdC domain-containing protein	-
BSHJ0_RS01665 (BSHJ0_00323)	ycdC	300506..301867 (+)	1362	WP_038428124.1	YcdB/YcdC domain-containing protein	-
BSHJ0_RS01670 (BSHJ0_00324)	cwlK	301875..302378 (-)	504	WP_029317221.1	peptidoglycan L-alanyl-D-glutamate endopeptidase CwlK	-
BSHJ0_RS01675 (BSHJ0_00325)	rapF	302501..303622 (+)	1122	WP_015715201.1	response regulator aspartate phosphatase RapJ	Regulator
BSHJ0_RS01680 (BSHJ0_00326)	ycdF	303729..304505 (+)	777	WP_015382686.1	SDR family oxidoreductase	-
BSHJ0_RS01685 (BSHJ0_00327)	ycdG	304530..306215 (+)	1686	WP_038427325.1	glycoside hydrolase family 13 protein	-
BSHJ0_RS01690 (BSHJ0_00328)	znuA	306403..307362 (+)	960	WP_003234733.1	metal ABC transporter substrate-binding protein	-
BSHJ0_RS01695 (BSHJ0_00329)	znuC	307417..308112 (+)	696	WP_014475714.1	zinc ABC transporter ATP-binding protein ZnuC	-

Sequence

Protein

• Length: 373 a.a.
• Molecular weight: 44400.29 Da
• Isoelectric Point: 4.8344

>NTDB_id=165098 BSHJ0_RS01675 WP_015715201.1 302501..303622(+) (rapF) [Bacillus subtilis strain HJ0-6]
MRAKIPSEEVAVKLNEWYKLIRAFEADQAEALKQEIEYDLEDMEENQDLLLYFSLMEFRHRIMLDKLMPVKDSDTKPPFS
DMLNEIESNQQKLTGLLEYYFYYFRGMYEFKQKNFILAIDHYKHAEEKLEYVEDEIEKAEFLFKVAEVYYHIKQTYFSMN
YASQALDIYTKYELYGRRRVQCEFIIAGNLTDVYHHEKALTHLCSALDHARQLEEAYMIAAAYYNVGHCKYSLGDYKEAE
GYFKTAAAIFEEHNFQQAVQAVFSLTHIYCKEGKYDKAVEAYDRGIKSAAEWEDDMYLTKFRLIHELYLGSGDLNVLTEC
FDLLESRQLLADAEDLLHDTAERFNQLEHYESAAFFYRRLMNIKKKLAEQRFQ

Nucleotide

• Length: 1122 bp

>NTDB_id=165098 BSHJ0_RS01675 WP_015715201.1 302501..303622(+) (rapF) [Bacillus subtilis strain HJ0-6]
ATGAGAGCAAAGATTCCATCAGAAGAAGTAGCAGTAAAGCTGAATGAATGGTACAAGCTCATTCGCGCATTTGAAGCAGA
TCAAGCAGAAGCGTTAAAGCAGGAGATTGAATATGATTTAGAAGATATGGAAGAGAATCAGGACTTGCTTTTATATTTTT
CTTTGATGGAATTCCGGCATCGAATCATGCTTGATAAGCTGATGCCGGTGAAAGACAGCGACACCAAGCCTCCGTTCTCT
GATATGCTGAACGAAATTGAAAGCAATCAGCAAAAACTCACGGGCTTATTGGAATACTACTTTTATTATTTCAGAGGAAT
GTACGAATTCAAGCAGAAAAATTTCATATTAGCGATTGACCATTATAAACATGCCGAGGAAAAGCTCGAGTATGTCGAGG
ATGAGATCGAAAAAGCTGAGTTTCTTTTTAAAGTCGCAGAAGTGTATTATCACATCAAACAAACGTATTTTTCCATGAAT
TATGCGAGCCAGGCGCTTGATATCTATACGAAATATGAACTGTACGGTCGCCGCCGGGTTCAGTGTGAATTTATCATCGC
CGGAAATTTGACCGATGTGTATCATCATGAAAAAGCACTGACCCACTTGTGCAGCGCTTTAGATCATGCCAGGCAGCTTG
AAGAAGCGTACATGATCGCCGCTGCCTATTATAATGTCGGACACTGTAAGTACAGTCTGGGTGATTACAAAGAAGCGGAG
GGCTATTTCAAAACAGCCGCCGCCATTTTTGAGGAGCACAACTTTCAGCAAGCTGTTCAAGCTGTATTTTCACTGACCCA
TATCTACTGTAAAGAGGGAAAATACGACAAGGCAGTAGAGGCGTATGACCGCGGGATAAAGAGCGCGGCTGAATGGGAGG
ATGACATGTACTTGACGAAATTCCGCCTCATTCATGAGCTGTATCTTGGAAGCGGCGACCTGAACGTGCTTACAGAATGC
TTTGACCTGCTGGAATCCAGGCAGCTTCTTGCTGACGCCGAAGATCTGCTGCATGATACAGCGGAACGTTTCAATCAGCT
GGAACATTACGAGTCAGCCGCTTTCTTTTACCGCAGGCTGATGAATATTAAAAAGAAGCTTGCCGAGCAGCGTTTTCAAT
AG

Domains

Predicted by InterProScan.

• response regulator aspartate phosphatase H, N terminal (RapH_N) (4-65)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapF	Bacillus subtilis subsp. subtilis str. 168	42.391	98.66	0.418
rapC	Bacillus subtilis subsp. subtilis str. 168	41.257	98.123	0.405