Detailed information    

insolico Bioinformatically predicted

Overview

Name   mutX   Type   Machinery gene
Locus tag   BEN15_RS08705 Genome accession   NZ_CP016877
Coordinates   1648173..1648655 (-) Length   160 a.a.
NCBI ID   WP_065973247.1    Uniprot ID   -
Organism   Streptococcus thermophilus strain KLDS 3.1003     
Function   DNA mismatch repair (predicted from homology)   
Homologous recombination

Genomic Context

Location: 1643173..1653655
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BEN15_RS08680 (BEN15_08675) lepB 1643841..1644398 (-) 558 WP_065973243.1 signal peptidase I -
  BEN15_RS08685 (BEN15_08680) - 1644521..1645750 (-) 1230 WP_065973244.1 tetratricopeptide repeat protein -
  BEN15_RS08690 (BEN15_08685) - 1645740..1646918 (-) 1179 WP_065973245.1 AI-2E family transporter -
  BEN15_RS10765 - 1646955..1647907 (-) 953 Protein_1634 IS30 family transposase -
  BEN15_RS08705 (BEN15_08700) mutX 1648173..1648655 (-) 483 WP_065973247.1 NUDIX hydrolase Machinery gene
  BEN15_RS08710 (BEN15_08705) - 1648919..1650168 (+) 1250 Protein_1636 ISL3 family transposase -
  BEN15_RS08715 (BEN15_08710) ftsX 1650230..1651159 (-) 930 WP_065973249.1 permease-like cell division protein FtsX -
  BEN15_RS08720 (BEN15_08715) ftsE 1651152..1651844 (-) 693 WP_002953094.1 cell division ATP-binding protein FtsE -

Sequence

Protein


Download         Length: 160 a.a.        Molecular weight: 18888.40 Da        Isoelectric Point: 4.7217

>NTDB_id=165076 BEN15_RS08705 WP_065973247.1 1648173..1648655(-) (mutX) [Streptococcus thermophilus strain KLDS 3.1003]
MTKLATICYIDNGKELLLLHRNKKPNDVHEGKWISVGGKLEAGETPDECARREIFEETRLTVKKMDFKGMITFPEFTPGH
DWYTYVFKVTDFEGKLISDEESREGTLEWVPYDQVLTKQTWEGDYEIFKWILEDKPFFSAKFSYDCNQNLIDKTVTFYDK

Nucleotide


Download         Length: 483 bp        

>NTDB_id=165076 BEN15_RS08705 WP_065973247.1 1648173..1648655(-) (mutX) [Streptococcus thermophilus strain KLDS 3.1003]
ATGACAAAGTTAGCTACCATTTGTTATATTGACAATGGGAAGGAGCTTTTGCTCCTACATCGTAATAAAAAGCCTAATGA
TGTTCATGAAGGAAAGTGGATTTCTGTCGGGGGAAAACTAGAAGCGGGAGAAACGCCTGACGAATGTGCTCGTCGTGAAA
TTTTCGAGGAAACTCGTTTGACAGTGAAAAAGATGGACTTCAAAGGTATGATTACCTTCCCAGAATTTACTCCGGGCCAC
GATTGGTATACCTATGTCTTTAAGGTGACTGATTTTGAAGGAAAACTAATTTCTGATGAGGAATCTCGTGAAGGGACACT
TGAATGGGTACCATATGATCAGGTTTTAACTAAACAAACCTGGGAAGGTGACTATGAGATTTTTAAGTGGATTCTAGAAG
ATAAACCTTTCTTCTCTGCAAAATTTAGCTACGATTGTAACCAAAACTTGATAGATAAAACTGTAACATTTTATGATAAA
TAA

Domains

Predicted by InterProScan.

NUDIX domain (NUDIX)

(3-130)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mutX Streptococcus pneumoniae R6

71.069

99.375

0.706

Multiple sequence alignment