Detailed information    

insolico Bioinformatically predicted

Overview

Name   yaaT   Type   Regulator
Locus tag   BEN15_RS05635 Genome accession   NZ_CP016877
Coordinates   1054605..1055411 (+) Length   268 a.a.
NCBI ID   WP_011680838.1    Uniprot ID   -
Organism   Streptococcus thermophilus strain KLDS 3.1003     
Function   accelerate the production of Spo0A~P (predicted from homology)   
Competence regulation

Genomic Context

Location: 1049605..1060411
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BEN15_RS05615 (BEN15_05610) tuf 1050654..1051850 (+) 1197 WP_002949971.1 elongation factor Tu -
  BEN15_RS05620 (BEN15_05615) tpiA 1052099..1052857 (+) 759 WP_002946314.1 triose-phosphate isomerase -
  BEN15_RS05625 (BEN15_05620) tmk 1053095..1053724 (+) 630 WP_002946312.1 dTMP kinase -
  BEN15_RS05630 (BEN15_05625) - 1053733..1054608 (+) 876 WP_011225600.1 DNA polymerase III subunit delta' -
  BEN15_RS05635 (BEN15_05630) yaaT 1054605..1055411 (+) 807 WP_011680838.1 regulatory iron-sulfur-containing complex subunit RicT Regulator
  BEN15_RS05640 (BEN15_05635) yabA 1055398..1055718 (+) 321 WP_002946304.1 DNA replication initiation control protein YabA -
  BEN15_RS05645 (BEN15_05640) rsmI 1055721..1056587 (+) 867 WP_065972976.1 16S rRNA (cytidine(1402)-2'-O)-methyltransferase -
  BEN15_RS05650 (BEN15_05645) - 1056724..1057959 (+) 1236 WP_065972977.1 ammonium transporter -
  BEN15_RS05655 (BEN15_05650) - 1057970..1058311 (+) 342 WP_011680840.1 P-II family nitrogen regulator -
  BEN15_RS05660 (BEN15_05655) - 1058409..1059065 (+) 657 WP_011225604.1 glycoside hydrolase family 73 protein -
  BEN15_RS05665 (BEN15_05660) - 1059088..1059909 (+) 822 WP_065972978.1 Cof-type HAD-IIB family hydrolase -
  BEN15_RS11290 - 1059927..1060400 (-) 474 Protein_1035 YgjV family protein -

Sequence

Protein


Download         Length: 268 a.a.        Molecular weight: 29758.16 Da        Isoelectric Point: 4.5847

>NTDB_id=165057 BEN15_RS05635 WP_011680838.1 1054605..1055411(+) (yaaT) [Streptococcus thermophilus strain KLDS 3.1003]
MTEVIGIKFEENGAVEYVVPDKNYTKGDFVVVLEKKDKRLAQVVMENTVFPEVSLPVDLNRVEGLASERDFARYDENLLK
AEQSMGVVADLIAQNQLDMKVVDIVFPLNSSYVLISFVAEKRVDFRQLLEDLAAYFKTRIELRQISSREESKIYGGLGPC
GRALCCSSFLGEFPPVSIKMAKNQSLSLNSGKMNGVCGRLMCCLSYEDDFYRDSKASYPDLGEEIETKEGRGQVIAIDVI
AGTVKVMFEKGGAPLTYGVEEVQLNGKA

Nucleotide


Download         Length: 807 bp        

>NTDB_id=165057 BEN15_RS05635 WP_011680838.1 1054605..1055411(+) (yaaT) [Streptococcus thermophilus strain KLDS 3.1003]
ATGACAGAAGTCATTGGAATCAAATTTGAAGAAAATGGAGCGGTAGAATACGTTGTTCCTGATAAAAATTACACCAAAGG
TGACTTTGTAGTCGTTTTGGAGAAAAAAGATAAGCGTCTAGCCCAGGTTGTTATGGAAAATACTGTTTTTCCAGAGGTTA
GTTTACCTGTGGATTTGAATCGGGTCGAAGGCTTGGCTAGTGAGAGAGATTTCGCTAGATATGATGAAAATCTTTTAAAG
GCTGAACAGAGTATGGGAGTAGTGGCTGATTTAATTGCTCAAAATCAGCTAGATATGAAAGTGGTGGACATAGTCTTTCC
TCTAAATAGCTCTTATGTGCTTATCAGTTTCGTGGCTGAAAAGCGGGTAGATTTTCGTCAATTGCTCGAGGATTTGGCGG
CTTATTTTAAGACGCGAATTGAGTTACGTCAAATTTCCAGTCGTGAGGAATCAAAAATTTATGGTGGTTTAGGTCCTTGT
GGACGTGCACTGTGTTGTTCTAGTTTTTTGGGCGAATTCCCACCGGTATCGATTAAGATGGCTAAAAATCAAAGTTTGTC
CTTGAATTCTGGTAAGATGAACGGTGTCTGTGGACGTCTCATGTGTTGTCTCAGTTATGAAGATGATTTTTACCGAGACA
GTAAGGCTAGTTATCCTGACTTGGGTGAAGAGATTGAGACCAAGGAAGGTAGAGGTCAAGTCATTGCTATTGATGTGATT
GCAGGGACTGTTAAAGTTATGTTTGAAAAAGGGGGAGCTCCCCTAACTTATGGAGTGGAGGAAGTTCAGCTAAATGGAAA
AGCGTGA

Domains

Predicted by InterProScan.

PSP1 C-terminal conserved region (PSP1)

(61-145)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  yaaT Bacillus subtilis subsp. subtilis str. 168

42.205

98.134

0.414

Multiple sequence alignment