Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0J   Type   Regulator
Locus tag   BE846_RS04225 Genome accession   NZ_CP016876
Coordinates   968340..969131 (-) Length   263 a.a.
NCBI ID   WP_042646110.1    Uniprot ID   -
Organism   Legionella pneumophila subsp. pneumophila strain FFI337     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 963340..974131
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BE846_RS04215 (BE846_04215) legS1 964492..965649 (-) 1158 WP_011947512.1 Dot/Icm T4SS effector LegS1 -
  BE846_RS04220 (BE846_04220) dacB 966455..968248 (-) 1794 WP_010948289.1 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase -
  BE846_RS04225 (BE846_04225) spo0J 968340..969131 (-) 792 WP_042646110.1 ParB/RepB/Spo0J family partition protein Regulator
  BE846_RS04230 (BE846_04230) ceg33 969248..969751 (-) 504 WP_011947516.1 Dot/Icm T4SS effector Ceg33 -
  BE846_RS04235 (BE846_04235) - 969925..970674 (-) 750 WP_011947517.1 type II CAAX prenyl endopeptidase Rce1 family protein -
  BE846_RS04240 (BE846_04240) rsmB 970671..971954 (-) 1284 WP_070322316.1 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB -
  BE846_RS04245 (BE846_04245) fmt 971951..972895 (-) 945 WP_013101888.1 methionyl-tRNA formyltransferase -
  BE846_RS04250 (BE846_04250) def 972892..973404 (-) 513 WP_010948295.1 peptide deformylase -

Sequence

Protein


Download         Length: 263 a.a.        Molecular weight: 30163.38 Da        Isoelectric Point: 5.9797

>NTDB_id=164941 BE846_RS04225 WP_042646110.1 968340..969131(-) (spo0J) [Legionella pneumophila subsp. pneumophila strain FFI337]
MQTRFTYLPVTSLQAGQYQPRQDFNVTELQELAQSISSQGLIEPLVVRPIAKERYEIIAGERRWRAAKLAGLNEVPCLIG
DYSDQQACALTLIENIQRQDLNLIEEATGYKRLIEEFHYHQDEIAALVGKSRSHVANILRLLTLTDKVKQLVRDKALSFG
HARVLVGLNPEQQEMFAHQIIGEEWSVRHLEQEIKFYKNKDMNSPKNPRKDRDIERLQTILAEQVGAPVQIINDGEDGGW
LKVKFFDNDTLAGLLERLGLRYD

Nucleotide


Download         Length: 792 bp        

>NTDB_id=164941 BE846_RS04225 WP_042646110.1 968340..969131(-) (spo0J) [Legionella pneumophila subsp. pneumophila strain FFI337]
ATGCAAACCCGATTTACTTATTTACCTGTCACAAGCCTGCAGGCAGGTCAGTATCAACCCAGGCAAGATTTTAATGTAAC
GGAGTTACAGGAATTGGCTCAGTCAATTTCTTCCCAGGGTTTAATTGAACCTTTGGTGGTAAGACCCATAGCAAAAGAGC
GATATGAAATTATTGCAGGGGAAAGAAGGTGGCGTGCGGCCAAATTGGCGGGATTAAATGAAGTCCCTTGTTTGATTGGA
GATTATAGTGATCAACAGGCATGTGCTCTCACTTTAATCGAAAATATTCAACGTCAGGATTTGAATTTAATCGAGGAAGC
CACTGGTTATAAGCGTTTAATTGAAGAATTCCATTATCATCAGGACGAGATCGCTGCGTTGGTAGGTAAATCTCGTAGCC
ATGTCGCAAATATTCTTCGTCTCCTTACCTTGACAGATAAGGTTAAACAGTTGGTTCGAGACAAAGCGTTATCCTTTGGC
CATGCTCGTGTATTGGTTGGCTTAAATCCTGAACAACAAGAAATGTTTGCTCACCAGATTATTGGAGAGGAATGGTCTGT
CAGACACTTAGAGCAAGAAATTAAATTTTATAAAAATAAAGATATGAATAGCCCAAAAAATCCCAGAAAAGACAGAGATA
TTGAGCGGTTACAGACTATCTTGGCTGAACAAGTGGGAGCTCCTGTACAAATTATAAACGATGGCGAAGACGGAGGTTGG
TTAAAAGTAAAATTTTTTGATAATGATACCCTTGCAGGGCTTTTGGAGCGTTTGGGCTTGAGATATGATTAG

Domains

Predicted by InterProScan.

ParB/Sulfiredoxin domain (ParB_N)

(7-96)

HTH domain found in ParB protein (HTH_ParB)

(146-195)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0J Streptococcus mutans UA159

37.308

98.859

0.369