Detailed information NTG0164924

Bioinformatically predicted

Overview

• Name: luxP
• Type: Regulator
• Locus tag: FORC18_RS21875
• Genome accession: NZ_CP013827
• Coordinates: 1316852..1317949 (-)
• Length: 365 a.a.
• NCBI ID: WP_053048215.1
• Uniprot ID: -
• Organism: Vibrio parahaemolyticus strain FORC_018
• Function: autoinducer sensor (predicted from homology) Competence regulation

Genomic Context

Location: 1311852..1322949

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
FORC18_RS21860 (FORC18_4105)	-	1312516..1313571 (-)	1056	WP_020838057.1	HlyD family secretion protein	-
FORC18_RS21865 (FORC18_4106)	-	1313610..1314065 (-)	456	WP_005477342.1	MarR family transcriptional regulator	-
FORC18_RS21870 (FORC18_4107)	luxQ	1314276..1316852 (-)	2577	WP_025521028.1	quorum-sensing autoinducer 2 sensor kinase/phosphatase LuxQ	-
FORC18_RS21875 (FORC18_4108)	luxP	1316852..1317949 (-)	1098	WP_053048215.1	autoinducer 2-binding periplasmic protein LuxP	Regulator
FORC18_RS21880 (FORC18_4109)	-	1318301..1318621 (-)	321	WP_005463466.1	GIY-YIG nuclease family protein	-
FORC18_RS21885 (FORC18_4110)	-	1318618..1319268 (-)	651	WP_053048216.1	YceH family protein	-
FORC18_RS21890 (FORC18_4111)	-	1319445..1319660 (-)	216	WP_005477197.1	hypothetical protein	-
FORC18_RS21895 (FORC18_4112)	-	1319987..1320301 (+)	315	WP_005453573.1	DUF496 family protein	-
FORC18_RS21900 (FORC18_4113)	-	1320424..1321761 (+)	1338	WP_025637865.1	MATE family efflux transporter	-
FORC18_RS21905 (FORC18_4114)	-	1321838..1322812 (-)	975	WP_053048217.1	Gfo/Idh/MocA family protein	-

Sequence

Protein

• Length: 365 a.a.
• Molecular weight: 41397.75 Da
• Isoelectric Point: 5.0568

>NTDB_id=164924 FORC18_RS21875 WP_053048215.1 1316852..1317949(-) (luxP) [Vibrio parahaemolyticus strain FORC_018]
MNKALVLSLISIVGMSPASQASQVLNGYWAYQEFLNEFPEQKHLTDALAAAVRDDPVPITPEKRHPLKISVVYPGQQISD
YWIRNIDAFEKRLDKLNIDYQINQVFTRPNADIKQQSLSLMEALKSNSDYLIFTLDTTRHRKFVEHVLDSTKTKLILQNI
TTPVREWETRQPFMYVGFDHAEGSRELAVEFGKQFPKNTHYSVLYFSEGYISDIRGNTFIHQVNQDSQFELQSAYYTKAT
KQSGYEAAKASLKKYPDVEFIYACSTDVALGAVEALSELGREDVMINGWGGGSAELDAILKGELDITVMRMNDDTGIAMA
EAIKWDLEGKPVPTVYSGDFEVVTKSDSPERIEALRKRAFRYSDN

Nucleotide

• Length: 1098 bp

>NTDB_id=164924 FORC18_RS21875 WP_053048215.1 1316852..1317949(-) (luxP) [Vibrio parahaemolyticus strain FORC_018]
ATGAATAAAGCGTTAGTATTGTCCCTGATTTCAATTGTCGGCATGTCTCCGGCTTCACAAGCCTCTCAGGTTCTTAACGG
CTACTGGGCGTATCAAGAATTCTTAAATGAATTCCCAGAACAGAAACACTTAACGGATGCTCTGGCTGCGGCCGTGAGAG
ACGATCCTGTACCTATTACCCCTGAAAAAAGACACCCATTAAAAATCTCCGTTGTTTATCCAGGGCAGCAGATTTCCGAT
TACTGGATAAGAAACATCGACGCGTTTGAGAAGCGCTTAGATAAACTCAATATTGATTACCAGATCAATCAAGTGTTTAC
GCGACCGAACGCCGATATCAAACAACAAAGCCTTTCTTTGATGGAAGCACTGAAAAGCAATTCTGACTACTTAATTTTTA
CACTCGATACGACCCGACATCGTAAGTTTGTCGAACATGTTTTAGATTCCACCAAAACCAAACTTATCCTGCAAAATATC
ACGACGCCAGTCCGTGAATGGGAAACTCGACAGCCTTTTATGTACGTCGGTTTCGATCACGCTGAAGGCAGTCGCGAACT
CGCTGTAGAGTTTGGCAAGCAGTTCCCGAAAAATACCCATTACAGCGTTTTGTACTTCTCTGAAGGCTACATTAGCGATA
TCCGTGGTAACACATTCATTCACCAAGTGAACCAAGACAGTCAGTTTGAACTACAATCTGCTTACTATACAAAAGCGACA
AAACAGTCCGGGTATGAAGCTGCAAAAGCGAGCTTGAAAAAGTACCCAGATGTCGAGTTCATTTATGCTTGTTCTACCGA
CGTTGCGTTAGGTGCCGTCGAAGCACTGTCTGAACTTGGCCGTGAAGACGTTATGATCAATGGCTGGGGCGGTGGTTCTG
CTGAGCTAGACGCTATCTTAAAAGGGGAGTTAGATATCACCGTCATGCGTATGAATGATGATACTGGCATTGCTATGGCA
GAGGCGATTAAATGGGATTTGGAAGGTAAGCCTGTACCAACGGTGTACTCTGGGGACTTCGAAGTTGTGACCAAATCAGA
TTCCCCTGAGCGAATTGAAGCTCTCAGAAAACGTGCATTTAGATACTCAGACAATTGA

Domains

Predicted by InterproScan.

• Periplasmic binding protein domain (Peripla_BP_4) (69-324)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
luxP	Vibrio cholerae strain A1552	64.56	99.726	0.644