Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0J   Type   Regulator
Locus tag   BE844_RS06460 Genome accession   NZ_CP016873
Coordinates   1471287..1472078 (-) Length   263 a.a.
NCBI ID   WP_042646110.1    Uniprot ID   -
Organism   Legionella pneumophila subsp. pneumophila strain FFI105     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 1466287..1477078
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BE844_RS06450 (BE844_06450) legS1 1467439..1468596 (-) 1158 WP_011947512.1 Dot/Icm T4SS effector LegS1 -
  BE844_RS06455 (BE844_06455) dacB 1469402..1471195 (-) 1794 WP_010948289.1 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase -
  BE844_RS06460 (BE844_06460) spo0J 1471287..1472078 (-) 792 WP_042646110.1 ParB/RepB/Spo0J family partition protein Regulator
  BE844_RS06465 (BE844_06465) ceg33 1472195..1472698 (-) 504 WP_011947516.1 Dot/Icm T4SS effector Ceg33 -
  BE844_RS06470 (BE844_06470) - 1472872..1473621 (-) 750 WP_011947517.1 type II CAAX prenyl endopeptidase Rce1 family protein -
  BE844_RS06475 (BE844_06475) rsmB 1473618..1474901 (-) 1284 WP_070322316.1 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB -
  BE844_RS06480 (BE844_06480) fmt 1474898..1475842 (-) 945 WP_013101888.1 methionyl-tRNA formyltransferase -
  BE844_RS06485 (BE844_06485) def 1475839..1476351 (-) 513 WP_010948295.1 peptide deformylase -

Sequence

Protein


Download         Length: 263 a.a.        Molecular weight: 30163.38 Da        Isoelectric Point: 5.9797

>NTDB_id=164816 BE844_RS06460 WP_042646110.1 1471287..1472078(-) (spo0J) [Legionella pneumophila subsp. pneumophila strain FFI105]
MQTRFTYLPVTSLQAGQYQPRQDFNVTELQELAQSISSQGLIEPLVVRPIAKERYEIIAGERRWRAAKLAGLNEVPCLIG
DYSDQQACALTLIENIQRQDLNLIEEATGYKRLIEEFHYHQDEIAALVGKSRSHVANILRLLTLTDKVKQLVRDKALSFG
HARVLVGLNPEQQEMFAHQIIGEEWSVRHLEQEIKFYKNKDMNSPKNPRKDRDIERLQTILAEQVGAPVQIINDGEDGGW
LKVKFFDNDTLAGLLERLGLRYD

Nucleotide


Download         Length: 792 bp        

>NTDB_id=164816 BE844_RS06460 WP_042646110.1 1471287..1472078(-) (spo0J) [Legionella pneumophila subsp. pneumophila strain FFI105]
ATGCAAACCCGATTTACTTATTTACCTGTCACAAGCCTGCAGGCAGGTCAGTATCAACCCAGGCAAGATTTTAATGTAAC
GGAGTTACAGGAATTGGCTCAGTCAATTTCTTCCCAGGGTTTAATTGAACCTTTGGTGGTAAGACCCATAGCAAAAGAGC
GATATGAAATTATTGCAGGGGAAAGAAGGTGGCGTGCGGCCAAATTGGCGGGATTAAATGAAGTCCCTTGTTTGATTGGA
GATTATAGTGATCAACAGGCATGTGCTCTCACTTTAATCGAAAATATTCAACGTCAGGATTTGAATTTAATCGAGGAAGC
CACTGGTTATAAGCGTTTAATTGAAGAATTCCATTATCATCAGGACGAGATCGCTGCGTTGGTAGGTAAATCTCGTAGCC
ATGTCGCAAATATTCTTCGTCTCCTTACCTTGACAGATAAGGTTAAACAGTTGGTTCGAGACAAAGCGTTATCCTTTGGC
CATGCTCGTGTATTGGTTGGCTTAAATCCTGAACAACAAGAAATGTTTGCTCACCAGATTATTGGAGAGGAATGGTCTGT
CAGACACTTAGAGCAAGAAATTAAATTTTATAAAAATAAAGATATGAATAGCCCAAAAAATCCCAGAAAAGACAGAGATA
TTGAGCGGTTACAGACTATCTTGGCTGAACAAGTGGGAGCTCCTGTACAAATTATAAACGATGGCGAAGACGGAGGTTGG
TTAAAAGTAAAATTTTTTGATAATGATACCCTTGCAGGGCTTTTGGAGCGTTTGGGCTTGAGATATGATTAG

Domains

Predicted by InterProScan.

ParB/Sulfiredoxin domain (ParB_N)

(7-96)

HTH domain found in ParB protein (HTH_ParB)

(146-195)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0J Streptococcus mutans UA159

37.308

98.859

0.369